KEGG   Apis dorsata (giant honeybee): 116184852
Entry
116184852         CDS       T09121                                 
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
adr  Apis dorsata (giant honeybee)
Pathway
adr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:adr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116184852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adr03019]
    116184852
Messenger RNA biogenesis [BR:adr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     116184852
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 116184852
NCBI-ProteinID: XP_031369670
LinkDB
Position
Unknown
AA seq 874 aa
MDPTEDWSGNCQILENETQKNENKEINQVIPGYASFHDYVQEAFHVMKLGIKNANNLPTG
SNFNYYSCFPSFRKNKDNNIKLLLNVVQHVLGITGVKNNISNRDIEEKFDLLLEANDVLL
DRANALMDKECGITKNSEVEVVVSHLKSQPINGGWNNQICQPLQISENAQSIRLLAGKNI
QRPQLMFKDKIDNSSKPWCPRIKDKPNSLKPLAIYLEESENGEVFNHPYEYELNMFVPPN
DQLKKSEPTKYKNLEDTLLVMIKDPSDIKLLINDLKQYKEIAVDLEHHSYRSFQGITCLM
QISTKDKDYLIDTLSLRSELHELNEIFTKPTILKVFHGADLDIQWLQRDLSLYVVNMFDT
HQAAKQLNLPYLSLAYLLKHYCNVDPDKHFQMADWRIRPLPEKLIKYAREDTHYLLYIKD
MLKNALIDVANGQINILKVVYDRSTEICKKTYVKPIWTEENCMTMYRKSQKMFNNKQLYA
LRELHKWRDDTARVEDDSIAYVLPNHMLLNIAETLPREMQGILACCDSIPPLVRQNLLKL
HKIILKAREQPLIKPILEEDIRQRLTQRNHHTNLDVWMYSPHDIPSDMEARADLPCLLDK
NNILETPISNIATKHTVTVFDSPATSEDEEVGKTEQESIKKKKFVFVSPFERYKRVIPMI
AEQEAQEREKQKQEEENRLNKLKKEETEIAESKNRVYEHFKQVSQIITGKNESELSRKPS
QTPLSQMPGRKRKRDSNINKQDEVQEEKTNDNLSTPVPILETRIIQDLKKDISEVEHLKE
EQNAQESITKKQKQIPNNETMNLLRSRKKGERERIIKDLEKKGMMPSKKFDYKIVDFSAF
QGGSQNVPNQVQFEQTMVRISFIYISFHYHLMNL
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggatcctacagaagactggagtggtaattgccaaatactagaaaatgaaactcaaaaa
aacgaaaataaagaaattaatcaagtcatacctggatatgcaagttttcatgattacgtt
caagaagcattccatgttatgaaacttgggatcaaaaatgctaataatttaccgacggga
tctaatttcaattattactcgtgttttcccagttttcgcaaaaataaagataataatata
aaattattattaaacgttgtgcaacatgtattgggaattactggtgtaaaaaataatatt
tcaaatcgcgacattgaagaaaaatttgatcttttattagaagcaaatgatgtactactg
gatcgagctaatgctttaatggacaaagaatgtggtattaccaaaaattcagaagtagaa
gttgtggtttcacatttaaagagtcaaccgatcaatggtggatggaacaatcaaatttgt
caaccattgcaaatttcagagaatgctcaatctatacgcttattggctggtaaaaacatt
caaagaccacagctaatgttcaaagataaaattgacaatagttcaaaaccttggtgtcca
aggattaaagataaacctaattctttgaaaccattagctatttatttggaagaaagtgaa
aatggtgaagtgtttaatcatccttatgaatatgaactgaatatgtttgttcctcccaat
gatcaattgaaaaaatctgaaccaacaaaatacaaaaacttggaagatacattattagta
atgattaaagatccatcggatattaagttattgataaatgatttaaaacaatataaagaa
atcgctgtagatttagaacatcattcttatagaagttttcaagggataacttgtttgatg
caaatttcgacaaaagataaagattacttgatagatactttgtcattgagatctgaatta
catgagttaaatgaaatttttacaaaaccaacaatattaaaagtttttcatggagcagat
ttagacatacaatggcttcaaagagatttatctttatatgtagtgaatatgtttgataca
catcaagcggcgaaacaacttaatttaccatatttaagtttagcatatttattgaaacat
tattgtaatgtagatcctgataaacattttcaaatggctgattggcgcataagaccttta
ccagaaaaacttattaaatatgctagagaagatacacattatttattgtatataaaggat
atgttaaaaaatgctttaattgatgtagctaatggacaaattaatattttgaaagttgta
tatgatagaagtacggagatttgtaaaaagacatatgttaaaccaatttggacagaagaa
aattgtatgacaatgtacagaaaaagtcagaaaatgtttaataataaacaactttatgct
ttaagagaattgcataaatggagagacgatacagctagagtagaagatgatagtattgct
tatgtattaccaaatcatatgttgttaaacatagctgaaacattacctcgtgaaatgcaa
ggaattttagcatgctgtgattctattcctcctttggttagacagaatttattaaaactg
cacaaaataatattgaaggctagagaacagccacttattaaaccaattcttgaagaagat
attagacaaagattaacacaaaggaatcatcatactaatttagatgtatggatgtattcc
cctcatgatattcctagtgatatggaagcaagagcagatttaccatgtttgttagataaa
aataatatattagaaacaccaatttcaaatattgcaacaaaacatacagtgactgtattt
gacagtccagcaacatccgaggatgaagaagttggaaaaactgagcaggaaagcattaaa
aagaaaaaatttgtttttgtaagtccatttgaacgatataaacgagttatacctatgata
gcagagcaagaagcacaagagagagagaaacaaaaacaagaagaagaaaatcgtttgaat
aaactgaaaaaggaagaaacagaaattgcagaaagcaaaaacagagtttatgaacacttt
aaacaagtttcccaaataataacaggaaaaaatgaatcagaattatcaagaaaaccatct
caaactccattaagtcaaatgccaggacgtaaaagaaaaagagattcaaatattaataaa
caagatgaagtacaggaagaaaaaactaatgataatttatcaactccagttccgatatta
gagaccagaattattcaagatctgaaaaaagatataagtgaagttgaacatttgaaagaa
gaacaaaatgcacaagaaagtataacaaaaaaacagaaacaaattccaaataatgaaacc
atgaatttgttgcgatcaagaaaaaaaggagaaagagaacgtataattaaagatttggaa
aaaaaaggcatgatgccatcaaaaaaattcgattataaaatcgtagattttagtgctttt
caaggaggtagtcaaaacgtacccaatcaagtacaatttgaacaaacaatggtaagaata
tcatttatttatatatcatttcattatcatttaatgaatttataa

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