Apis dorsata (giant honeybee): 116184852
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Entry
116184852 CDS
T09121
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
adr
Apis dorsata (giant honeybee)
Pathway
adr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116184852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adr03019
]
116184852
Messenger RNA biogenesis [BR:
adr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
116184852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
116184852
NCBI-ProteinID:
XP_031369670
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MDPTEDWSGNCQILENETQKNENKEINQVIPGYASFHDYVQEAFHVMKLGIKNANNLPTG
SNFNYYSCFPSFRKNKDNNIKLLLNVVQHVLGITGVKNNISNRDIEEKFDLLLEANDVLL
DRANALMDKECGITKNSEVEVVVSHLKSQPINGGWNNQICQPLQISENAQSIRLLAGKNI
QRPQLMFKDKIDNSSKPWCPRIKDKPNSLKPLAIYLEESENGEVFNHPYEYELNMFVPPN
DQLKKSEPTKYKNLEDTLLVMIKDPSDIKLLINDLKQYKEIAVDLEHHSYRSFQGITCLM
QISTKDKDYLIDTLSLRSELHELNEIFTKPTILKVFHGADLDIQWLQRDLSLYVVNMFDT
HQAAKQLNLPYLSLAYLLKHYCNVDPDKHFQMADWRIRPLPEKLIKYAREDTHYLLYIKD
MLKNALIDVANGQINILKVVYDRSTEICKKTYVKPIWTEENCMTMYRKSQKMFNNKQLYA
LRELHKWRDDTARVEDDSIAYVLPNHMLLNIAETLPREMQGILACCDSIPPLVRQNLLKL
HKIILKAREQPLIKPILEEDIRQRLTQRNHHTNLDVWMYSPHDIPSDMEARADLPCLLDK
NNILETPISNIATKHTVTVFDSPATSEDEEVGKTEQESIKKKKFVFVSPFERYKRVIPMI
AEQEAQEREKQKQEEENRLNKLKKEETEIAESKNRVYEHFKQVSQIITGKNESELSRKPS
QTPLSQMPGRKRKRDSNINKQDEVQEEKTNDNLSTPVPILETRIIQDLKKDISEVEHLKE
EQNAQESITKKQKQIPNNETMNLLRSRKKGERERIIKDLEKKGMMPSKKFDYKIVDFSAF
QGGSQNVPNQVQFEQTMVRISFIYISFHYHLMNL
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggatcctacagaagactggagtggtaattgccaaatactagaaaatgaaactcaaaaa
aacgaaaataaagaaattaatcaagtcatacctggatatgcaagttttcatgattacgtt
caagaagcattccatgttatgaaacttgggatcaaaaatgctaataatttaccgacggga
tctaatttcaattattactcgtgttttcccagttttcgcaaaaataaagataataatata
aaattattattaaacgttgtgcaacatgtattgggaattactggtgtaaaaaataatatt
tcaaatcgcgacattgaagaaaaatttgatcttttattagaagcaaatgatgtactactg
gatcgagctaatgctttaatggacaaagaatgtggtattaccaaaaattcagaagtagaa
gttgtggtttcacatttaaagagtcaaccgatcaatggtggatggaacaatcaaatttgt
caaccattgcaaatttcagagaatgctcaatctatacgcttattggctggtaaaaacatt
caaagaccacagctaatgttcaaagataaaattgacaatagttcaaaaccttggtgtcca
aggattaaagataaacctaattctttgaaaccattagctatttatttggaagaaagtgaa
aatggtgaagtgtttaatcatccttatgaatatgaactgaatatgtttgttcctcccaat
gatcaattgaaaaaatctgaaccaacaaaatacaaaaacttggaagatacattattagta
atgattaaagatccatcggatattaagttattgataaatgatttaaaacaatataaagaa
atcgctgtagatttagaacatcattcttatagaagttttcaagggataacttgtttgatg
caaatttcgacaaaagataaagattacttgatagatactttgtcattgagatctgaatta
catgagttaaatgaaatttttacaaaaccaacaatattaaaagtttttcatggagcagat
ttagacatacaatggcttcaaagagatttatctttatatgtagtgaatatgtttgataca
catcaagcggcgaaacaacttaatttaccatatttaagtttagcatatttattgaaacat
tattgtaatgtagatcctgataaacattttcaaatggctgattggcgcataagaccttta
ccagaaaaacttattaaatatgctagagaagatacacattatttattgtatataaaggat
atgttaaaaaatgctttaattgatgtagctaatggacaaattaatattttgaaagttgta
tatgatagaagtacggagatttgtaaaaagacatatgttaaaccaatttggacagaagaa
aattgtatgacaatgtacagaaaaagtcagaaaatgtttaataataaacaactttatgct
ttaagagaattgcataaatggagagacgatacagctagagtagaagatgatagtattgct
tatgtattaccaaatcatatgttgttaaacatagctgaaacattacctcgtgaaatgcaa
ggaattttagcatgctgtgattctattcctcctttggttagacagaatttattaaaactg
cacaaaataatattgaaggctagagaacagccacttattaaaccaattcttgaagaagat
attagacaaagattaacacaaaggaatcatcatactaatttagatgtatggatgtattcc
cctcatgatattcctagtgatatggaagcaagagcagatttaccatgtttgttagataaa
aataatatattagaaacaccaatttcaaatattgcaacaaaacatacagtgactgtattt
gacagtccagcaacatccgaggatgaagaagttggaaaaactgagcaggaaagcattaaa
aagaaaaaatttgtttttgtaagtccatttgaacgatataaacgagttatacctatgata
gcagagcaagaagcacaagagagagagaaacaaaaacaagaagaagaaaatcgtttgaat
aaactgaaaaaggaagaaacagaaattgcagaaagcaaaaacagagtttatgaacacttt
aaacaagtttcccaaataataacaggaaaaaatgaatcagaattatcaagaaaaccatct
caaactccattaagtcaaatgccaggacgtaaaagaaaaagagattcaaatattaataaa
caagatgaagtacaggaagaaaaaactaatgataatttatcaactccagttccgatatta
gagaccagaattattcaagatctgaaaaaagatataagtgaagttgaacatttgaaagaa
gaacaaaatgcacaagaaagtataacaaaaaaacagaaacaaattccaaataatgaaacc
atgaatttgttgcgatcaagaaaaaaaggagaaagagaacgtataattaaagatttggaa
aaaaaaggcatgatgccatcaaaaaaattcgattataaaatcgtagattttagtgctttt
caaggaggtagtcaaaacgtacccaatcaagtacaatttgaacaaacaatggtaagaata
tcatttatttatatatcatttcattatcatttaatgaatttataa
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