Acinetobacter dispersus: FPL17_03290
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Entry
FPL17_03290 CDS
T06602
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
ads
Acinetobacter dispersus
Brite
KEGG Orthology (KO) [BR:
ads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ads03019
]
FPL17_03290 (hrpA)
Enzymes [BR:
ads01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FPL17_03290 (hrpA)
Messenger RNA biogenesis [BR:
ads03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FPL17_03290 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
T2SSE
NACHT
PhoH
ResIII
AAA_30
SLFN-g3_helicase
TsaE
SRP54
Motif
Other DBs
NCBI-ProteinID:
QHH96614
UniProt:
A0A6P1LLM8
LinkDB
All DBs
Position
777382..781236
Genome browser
AA seq
1284 aa
AA seq
DB search
MQSHLNVDQLVMARDRHRLNRLRKDKKTETAEIEKLIQQSNHKVKQRLARVPKIKLNQDL
PVTQYADRLIEAIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARS
VSQRIAEEVGEKLGESIGFKIRFNEQGSQDSIVRLMTDGILLAELTNDRFLSKYDTIIID
EAHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVNRFSQYFYDAPIFEVEGRSFPVE
LRYRPISELSIVGSDDDEFDDFEENLPRAVVQAVEECFADAEAKGHPEYADILIFASTEQ
EIRELQETLQKYGPRHTEVLPLYARLALAEQQKIFSPGGKGRRIIIATNVAETALTVPNI
RYVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRIAAGVCIRLYSEEDFLSR
PEFTEPEIKRTNLASVILQMQSLGLGNLEDFDFIEPPDFRLVNDGRKLLVELGALNERKN
DLTKVGQMMARMPIDPRLARMLVGGAHFGVLKETLIIVSALAIQDPRERPADKQMQADQK
HALFKEADSDFLFYLKLWNTLQTSPETQTENKRRQFARQHFLSWLRLREWKQTHQQLVEL
AEGLKLSFNEKSANYENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTLHKTN
TAWVMAFEMVETSQVYLRALAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYAQISL
FGLIIEPKRLINFEKVDQPAAHEIFLRDALTTGHLGITPPFLKHNLLKLEEVERVEDKLR
RRDLVVDEETIYQFYAAKVPEEIASRSSFEDWRATIESEHPRYLFVDDDALWMNDRPTTH
QFPDYLHNGQLRLAASYRFDPSHDEDGATVKIPVQALPQVDEKQWSWGIPGWRQDLIEAL
LKALPKDKRRNLVPIPDTAKKLMQGIDAVHLREHLFSYLAFALRGEQITEKDFSFERIDQ
YLIPFIKVVDEKGKLIAQGRDLDELKARCHVETHRPVKQQQGEFQTFPENFVFEASQKVT
GVVIKQYQALVPTKLFAELEAKDESGVVIQTFNDQDEAIKQHREGVIRLVHMQLGDLIRQ
LKKQISKPLALAYSPLGDRAKLEQMLIYATLQVSIQDLPKNAAEFQQLLTETKKQFLANG
QQTLNDLTEIFTQWQQIRRELLVLDQTIFGRSVDDIEDQLDLMSLANFVYSRPAEIWQEY
PRYLKALLLRLDRLPNNLQRDLAAIDDVDPWMDKVFKFKNDPKIKELYLMLEEFRISLFS
QPMKTKLPISPTRLQKLWDRLAIG
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
gtgcagagtcatttaaatgtagatcaattggttatggctcgtgaccgtcaccgtttaaat
cgactgcgcaaagataaaaaaacagaaacagcggaaattgaaaaactgattcagcaatcg
aatcataaggtaaaacaacggctagcacgtgttccaaagatcaagctgaatcaagacctg
cctgttacccaatacgcagaccgtttaattgaggcgattcaaaagcatcaggtcatcatt
gttgctggtgaaacgggttctggtaaaaccacacagcttccacaaattgccatgctggca
ggtcgtggactcactgggatgattggtcatactcagccacgtcgattggcggctcgaagt
gtctcacaacgtattgcggaagaagtgggcgagaagcttggcgaatcaattggctttaag
attcgttttaatgaacaaggctcgcaagattcaatcgtccgtttgatgacagatggtatt
ttgttggctgaattgaccaatgaccgttttttatcaaaatacgatacgatcattattgat
gaagcgcatgaacgttcactcaatattgacttcatcatgggctatctcaagcagcttttg
ccaaaacgtcctgatttaaaagtcatcgtgacctcggctacgctagatgtaaaccgtttt
agccagtatttttatgacgcaccaatttttgaagtagaaggccgtagttttcctgtcgag
ctgcgttatcgtcctatctctgagctgagtattgtcggcagtgatgacgacgagtttgat
gattttgaagaaaatttaccgcgcgctgtagtacaagcagtagaagagtgttttgccgat
gctgaagcaaaaggtcatcctgaatatgcggatattttaatttttgccagtacagagcag
gaaatccgtgaattgcaggaaacgctgcaaaaatatggccctcgccatactgaggtattg
cctttatatgcgcgtttggctctagcagaacagcaaaagatttttagtccaggcggtaaa
ggtcgacgcattattattgcgaccaacgtggctgaaactgcattgacggttccgaatatt
cgctatgtgattgacagtggttttgctcgtatctcgcgttataactaccgttcgcgggta
cagcgcttaccgattgaagcgatttcacaagctgcagccaaccagcgtaaaggccgctgt
ggtcgtatagctgcgggtgtatgtattcgtctatacagtgaagaagactttttaagtcgt
cctgagtttactgaacctgaaattaaacggacaaacttggcttctgttattttgcaaatg
caaagcttaggtttaggtaatctagaagattttgattttattgagccacctgatttccgt
ttggtgaatgacggacgtaagctattggttgagttaggtgcattaaacgaacgtaagaat
gatttaaccaaagttggtcaaatgatggcgcgtatgccaattgacccacgtttagcacgt
atgttggttggcggggctcattttggtgtgctcaaagaaactctgattattgtcagtgcc
ttagccattcaagatccacgtgagcgtcctgcggacaagcaaatgcaggcagatcaaaag
catgcactgtttaaagaagctgactcagactttttattctatttaaaactttggaatacg
ctgcaaaccagtcctgaaacacaaactgaaaataagcgccgtcaatttgcacgtcagcac
tttttaagttggttacgtcttcgtgaatggaaacaaacccatcagcaattggttgaattg
gcagaaggtttaaagctcagttttaatgaaaaatcagccaattatgaaaacttacaccgt
gcgctgttaactggtttgctttcatttattgcgaataaaacagacgaacgaaataccttt
atggcggtgcgccagcagaaggctaaagtttttcctgcgagtaccttacacaagaccaat
accgcttgggtcatggcatttgagatggtggaaacctctcaggtgtatttacgggctttg
gcaaaaattgatcctgaatggattctattggctgcgcgtgatttattgaaatatcactat
tttgaaccacattggtcgaaaaaagcgggtattgttaatgcttatgcgcagatttctctg
tttggtttgattattgaaccgaaaagattaatcaattttgaaaaagtggaccaacctgcg
gcacatgaaatctttttacgtgatgccttaacgacaggtcatttaggtattacgccgcca
ttcttaaaacataacttactcaaacttgaagaagttgaaagagttgaagataaattacgt
cgccgtgatttggtggtggatgaagagactatttaccagttctatgcagcgaaagtgcca
gaagaaattgccagtcgcagcagttttgaagattggcgtgcaaccattgagtcagagcat
ccgcgttatttatttgtagatgatgatgcgttatggatgaatgatcgtccaacgacgcat
caattcccagattatttgcataatggacaactgcgacttgctgccagctatcgttttgac
cctagccatgatgaagatggtgcgacagttaaaattcctgtgcaggctttaccgcaagtg
gatgaaaagcagtggtcatggggcattccagggtggcgtcaggatttaatcgaagcttta
ttaaaagcactaccaaaagacaagcgtcgcaatttggtgccgatcccagatactgctaaa
aagctcatgcaggggattgatgcggttcatctgcgtgaacatttatttagctacttggcg
tttgctttacgcggtgagcagattacggaaaaagatttttcttttgagcgcattgatcag
tatctgattccgtttatcaaggtggtagatgaaaaaggtaagttaatcgcacaaggtcgt
gatctggatgagttgaaagcacgttgccatgttgaaacccatcgtccagtcaaacagcaa
caaggtgagttccaaaccttccctgaaaattttgtattcgaagcatcgcaaaaagtaaca
ggtgttgtgatcaagcaatatcaggctttggttccaactaaactatttgctgagcttgaa
gccaaagatgaatctggcgtggtgattcaaacctttaatgaccaagatgaagcgattaag
caacatcgagaaggggtgattcgcttggtgcatatgcagttgggggatttaatccgtcaa
ttgaaaaaacagatttccaagcccttggctttggcttattcaccattaggtgatcgagca
aaactggaacaaatgctgatctatgcaaccttgcaggtttcaattcaagatctaccaaaa
aatgcggctgagtttcagcagttactgaccgaaactaaaaagcaatttttagcaaatggt
caacagacattaaatgatttaactgaaatatttactcaatggcagcagatccgccgtgag
ttattggtgttggatcagactatctttggtcgaagtgtagatgatattgaagatcaactt
gatttaatgtcattagcaaactttgtttatagccgtcctgctgaaatttggcaggaatac
ccgcgttatttaaaagcgctgctattgcgtttagatcgtttgcccaataatctacaacga
gaccttgctgcaattgatgatgtcgatccatggatggacaaagtatttaaatttaaaaat
gatcctaaaatcaaagaactgtatttgatgttggaagaattcagaatttctttgttttct
cagccgatgaaaacaaagctgcctatttcaccaactagattacaaaaactatgggatcga
ttagcaatcggttaa
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integrated database retrieval system
