Acinetobacter dispersus: FPL17_12190
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Entry
FPL17_12190 CDS
T06602
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ads
Acinetobacter dispersus
Pathway
ads03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ads00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPL17_12190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ads03019
]
FPL17_12190
03009 Ribosome biogenesis [BR:
ads03009
]
FPL17_12190
Enzymes [BR:
ads01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FPL17_12190
Messenger RNA biogenesis [BR:
ads03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FPL17_12190
Ribosome biogenesis [BR:
ads03009
]
Prokaryotic type
rRNA processing factors
FPL17_12190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QHH98270
UniProt:
A0A6P1LL40
LinkDB
All DBs
Position
2626949..2630290
Genome browser
AA seq
1113 aa
AA seq
DB search
MKRMLINATHAEEVRVALITGNRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAQRQGFLSMREIANSYFKADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEILASLNLPRGMSVIVRTAGIGRTQEELQL
DLQHLLDLWAQIQGSASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKDRNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERQGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSNVRVTVLPHPHLETPHY
QIQFNPDGFAPSSYERTEATRSSEKELGYESSDWHLEDAEHHHAAPTQNNAAPQKKAAQQ
HAAQAKQPQATTQKSASPCAWLENLFVQKQAQTTDQARSAQNAAAAIEQMVNNGAVSRGQ
FGQVNAPAATEVAAPAANNAYISQNPVKQEAREQFDKDEKSNRPNQNQKKRKHKEQREQH
AHAHEQQTQVHEEVVQLSRQEQRHEQRELKRQQKRQQPQESQNQQQHNNDAAHGNEAAPL
PRRDRNQQRPNRPNRHRDQSVLNEAPATTEAPANPQQVKVDVVDAPRSAPMNTALIVNID
QGQSEIVALNSQQAPALTPKVEAAVVEKAETAPVVQAEKAAVAEQAPATETAQAPVKRAA
NDPRSRRRQRGAQAAQKAAPKVVVAPSQIPTLGQYTVSSLIRHVYGEDCTILIDQFGLIT
TFNRALQKFAEQYANSLVVETTVEENKRPVTRDAELPSKKVVEEAEPAPVLALTPPEAAA
IRVANDPRERRRLAKMAAEQAKEAHVASNAAPAPVESTESKEEVKQAEDAVVAEAAVTTA
PEQQPLELASTDAVAEVAPVEAEAVEPVVTAEVETVSETVAEVTEPAQAVEKAEQATTST
EAELDDEAAKAEKEKSSRPRRPRGRPPKKATAE
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaacccacgcagaagaagttcgcgttgcacttatcact
ggtaatcgtctttacgatttcgatttagagaatcgtacacgcgaacaaaaaaaatcaaat
atctataaaggtcatgtcactcgcgttgaaccgtctttagaagcggttttcgttgagtac
ggcgcacagcgtcaaggctttttatcgatgcgagaaattgcaaactcgtacttcaaagct
gaccctcgtcaaacctcaaatattcgtgaactcatcactgaaggcactgaattactggtt
caagttgaaaaagaagagcgtggcaataaaggtgctgccctatctacttttatctcactt
gcaggccgttatttggtcctcatgccaaacaatccaaaaggtggtggtattagccgtcag
atttctggttcagttcgtgaagaattgaaagaaattttagcgtctttaaatctaccacgt
ggcatgagcgtcatcgttcgtaccgcagggattggccgtactcaagaagagcttcaactc
gacttgcaacatctgcttgacctttgggcacaaatccaaggttcagcaagttcaggccca
tcaccaatgctagttcatcaagaagctggtgtagtgacgcgtgcgattcgtgattattta
cgcgatgacgttgctgagattctgattgatagcgagcaagcctacaacgaagcgtataac
ttcgtaaaagcagtgatgccgcgtcaactcgacaaattaaaaacctatacattgaatgag
cctttatttgctcattttggtatcgaaagccaaatccaaactgcgtatgagcgtgaagta
aaacttccatctggcggttcaatcgtgattgatcaaaccgaagcactggtatcaattgat
atcaactcggcaaaatcaacacgtggccatgatgttgaagaaactgcgctcaataccaac
ttagaagctgccgaagaaattgcacgtcaacttcgtttacgtgatatcggtggtttagtc
gtgatcgattttatcgacatgaccaaagaccgtaaccaacgtatggttgaagcgaaatta
cgggaagcaactcaaagcgatcgcgcacgtattcaattcggtcaactgtcacgttttggc
ctcatggaaatgagtcgtcaacgcctacgtccttctttagaagaagcgactggctacgta
tgcccacgctgtcatggcacaggcatggtacgtgacttacgttcactgtcactttcgatt
atgcgtaaggttgaagaaatcgctttacgtgagcgtcaaggtgaagttcaagtcgaagtc
cctgttgaaattgcagcattcttgttgaatgaaaagcgtcacagcctggtttaccttgag
caaacttcgaatgttcgtgtgacagtattgcctcacccacatttagaaactccacattat
caaatccagttcaatccagacggttttgcaccttctagttatgaacgtacagaagcaacc
cgttcaagtgaaaaagaactgggttatgaatcttctgactggcatttagaagatgcagag
caccaccatgctgcaccaacacaaaataatgcagcaccacaaaagaaagcggcacaacaa
cacgctgctcaagcaaaacaaccacaagcaacgacacaaaagtcagcaagtccttgtgca
tggttagaaaacttatttgttcaaaaacaagcacaaaccactgaccaagcacgttctgca
caaaatgcagcagcagccattgagcaaatggtaaataatggtgctgtaagccgtggtcaa
tttggtcaagtgaatgcacctgctgccaccgaagtcgcagcaccagcagcaaacaatgct
tatatttcgcaaaatcctgtgaaacaagaagctcgtgagcagtttgataaagacgagaaa
tcaaatcgtccaaatcaaaatcagaagaagcgtaagcacaaagaacaacgcgagcaacac
gcgcatgcacatgaacaacaaactcaagtgcatgaagaagtggtacagctttcacgccaa
gaacagcgccatgagcaacgtgagctaaaacgtcagcaaaaacgtcaacaacctcaagaa
tcacaaaaccagcaacagcacaacaatgatgctgcgcatggtaacgaggctgcaccgttg
ccacgtcgtgatcgtaatcagcaacgtccaaatcgcccaaatcgtcatcgcgatcaaagc
gtattgaatgaagctcctgctacaactgaagcaccagcgaatccgcaacaggtgaaagtt
gatgtggtagatgctccacgttcagcaccaatgaacactgccctaatcgttaatattgat
caaggtcaaagtgaaattgtggctctgaactcgcaacaagcacctgctttgacacctaaa
gttgaagctgcggttgttgaaaaagctgaaaccgcacctgttgttcaagcagaaaaagct
gccgttgctgaacaagcacctgcaacagaaactgctcaagcacctgtaaaacgtgcagcc
aatgacccacgttcacgtcgtcgtcaacgtggtgctcaagcagctcaaaaagcagcacct
aaagtcgttgtggcaccctcacaaattccgactttgggtcaatacactgtcagcagtttg
attcgtcatgtctatggtgaagattgcactattctcattgaccaatttggcttaatcacc
acgtttaaccgcgcactacaaaagtttgctgaacaatatgcaaactctttagtcgtggaa
acaacggttgaagaaaataagcgtcctgtcacacgtgatgctgaacttccaagcaaaaaa
gtagtggaagaagctgaaccagcacctgtgctagcacttacaccaccagaagcagcagca
attcgtgttgccaatgatccgcgtgaacgtcgtcgtttagcgaaaatggcagcagagcaa
gcgaaagaagcacatgttgcctcaaatgcagcaccagctcctgtggaaagcactgaatcg
aaagaagaagtgaaacaagcagaagatgccgttgtcgcagaagcagccgtaactactgca
cctgagcaacaacctttagaacttgccagtacagatgctgtagcagaagttgcgccagtt
gaggctgaagcagttgaacctgttgtcactgctgaagttgaaaccgtaagcgagacggtt
gcagaagttaccgagcctgctcaagctgttgaaaaagctgaacaagcgacaacttcgaca
gaagcagaattggatgatgaagcagcgaaagcggaaaaagagaaatctagccgccctcgt
cgtccacgtggccgtccacctaaaaaagccacagctgagtga
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