Acinetobacter dispersus: FPL17_12780
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Entry
FPL17_12780 CDS
T06602
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ads
Acinetobacter dispersus
Pathway
ads03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ads00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FPL17_12780 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ads03021
]
FPL17_12780 (rpoC)
03400 DNA repair and recombination proteins [BR:
ads03400
]
FPL17_12780 (rpoC)
Enzymes [BR:
ads01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FPL17_12780 (rpoC)
Transcription machinery [BR:
ads03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FPL17_12780 (rpoC)
DNA repair and recombination proteins [BR:
ads03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FPL17_12780 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QHH98379
UniProt:
N9MKP2
LinkDB
All DBs
Position
complement(2756199..2760392)
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKPDSEGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLTDEEYYNALEEHGDE
FTAKMGAEAIQDLLKDIDLEAEIARLREEIPQTTSETKLKKSSKRLKLMEAFKDSNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNR
ALATGKVAIHARVKVRVHQTVIDENGQREKQTIIVDTTPGRCLLWEVVPQGLSFESINLE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPNKHTIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITESDCGTAGGLVMTPFIQGGDVIEPL
RDRVLGRVTAEDVRRASDDEVVLPRGTLIDEKIAAELEEAGVDEVKVRSVIACESTFGVC
ARCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDLGRERERYKLPYGASILLKDGEAVEAGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTTDGGEQFYFLPQNTIVTVRDGATIGVGDVLGRVPQETSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGVVSFGKETKGKNRLVITPDDGSEIYEELIPKWRTINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVVVRQMLRKV
DITDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQESEAAEFELHND
FSEVDQAFSQALNSDQF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgtaagaaaccggattcagaaggtcatgcacctgtt
gaatttgaccgtatccgtattggtcttgcgtcgccagagatgattaagtcatggtctcac
ggtgaagttaaaaagcctgaaaccattaactaccgtacttttaaacctgaacgtgacggt
ttgttctgtgccaaaatctttggtccagtaaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggtgtcatttgtgaaaaatgtggcgttgaagtaacaactgcc
aaagttcgtcgtgaacgtatgggtcacatcgagcttgcatctccagttgcacatatttgg
ttcttgaaatcattaccgagccgtatcggtttacttcttgatatgacattacgtgatatc
gaacgcgtattgtatttcgaatcttatgttgtaacagatcctggtatgactccgtttgaa
aagtatcaacttttaacagacgaagaatactacaatgcacttgaagaacacggtgatgaa
ttcactgcgaagatgggtgcagaagcgattcaggatctattaaaagatatcgatcttgaa
gctgaaattgcgcgtttacgcgaagaaattcctcaaacaacctctgagacgaaacttaag
aaatcgtctaagcgtttgaaattgatggaagctttcaaagattcaaataacaagcctgaa
tggatggtgatgaacgtacttccggtacttccaccagatttacgtccgcttgtaccactt
gaaggtggtcgtttcgcgacttcagacttgaacgatttgtatcgtcgtgtgatcaaccgt
aacaaccgtttaaaacgtcttctagacttagctgcaccagacattatcgtacgtaacgaa
aaacgtatgttacaagagtctgtagatgcgttgcttgataacggtcgtcgtggtcgtgca
attacaggttcgaacaaacgtccattgaaatctttggcagacatgatcaaaggtaaacaa
ggtcgtttccgtcaaaacttacttggtaagcgtgttgactattctggtcgttcggtaatt
accgttggtcctactttacgtcttcaccaatgtggtcttccgaagaagatggcacttgaa
ctattcaagccatttattttcgcgaaattacaagcttctggccaagcaacaaccattaaa
gctgcgaagaaaatggttgagcgtgagacaccagaagtttgggacgttcttgcatctgtg
attcgtcaacatccagtcatgttgaaccgtgcgccaacacttcaccgtttaggtcttcaa
gcgtttgaacctattctgatcgaaggtaaagcgatccgtcttcacccactcgtatgtgct
gcgtttaacgccgacttcgatggtgaccaaatggcggtacacgttccattgacacttgaa
gcacagttagaagcacgtgcgttgatgatgtcaaccaataacatcttgtcacctgcaaac
ggtgagccaatcatcgttccttctcaggacgttgtcttgggtctttactacatcacgcgt
gatgcggtaaatgccaaaggtgaaggcatggtgtttgcggatacacacgaagttaaccgt
gccttagcgactggtaaagttgcgatccatgcacgcgttaaagtacgtgtacaccaaact
gtaattgatgaaaatggtcagcgtgaaaagcaaactattattgttgatacaacaccaggt
cgttgcttgttgtgggaagttgttccacaaggtttaagctttgaatcgatcaaccttgag
atgactaagaaaaacatctctaagttaatcaactcttgctaccgtaagcttggtttgaaa
gatactgttatctttgctgatcaattgatgtatttgggcttccgtcaagcgacgcgttca
ggtgtatctgtaggtatggaagacatgcttattccaccaaataagcacaccattatcgac
aaagctgaaactgaagttcgtgaaatcgaacaacagtttgaacaaggcttcgtaactgcg
ggtgagcgctataacaaagtggtcgatatttgggctcgtaccaatgaccaagttgcgaaa
gcaatgatggataacttgtcttatacccttgtgaaaaacaaacaaggtgaagacgagaaa
cagaagtcattcaactcaatttatatgatgtctgactcgggtgcccgtggtagtgcggcg
cagatccgtcagcttgctggtatgcgtggtttgatggctaagccagatggctcgatcatt
gagaccccaattaaagcaaacttccgtgaaggtttgacagtacttcagtacttcatctca
acacacggtgcgcgtaaaggtttggccgataccgcattgaaaactgcgaactctggttac
ttgactcgtcgtcttgtagacgtagcacaagatttagttattactgaatctgattgtggt
acagctggtggcttagtgatgacaccattcattcaaggtggtgacgtgatcgagccatta
cgcgatcgcgtattgggtcgtgtaactgctgaagatgtacgtcgtgcatctgatgatgaa
gttgtacttccacgtggtacgttaattgacgagaaaattgctgctgagcttgaagaagcg
ggtgtcgatgaagttaaagtacgttcagtaattgcatgtgaatcgacattcggtgtatgt
gcacgctgttatggtcgtgatcttgcacgcggtcacttggtgaatccaggtgaatctgtc
ggtgtaatggctgctcagtcaattggtgaacctggtacacagttaacaatgcgtaccttc
cacgttggtggtgctgcaagccgaacttctgctgcaaacagtgttcaagtacgtaataaa
ggtactgtacgtttccacaacgtgaaaactgtacaacatgccaaaggtcacttagtgtca
gtttcacgttcaggtgaaattggtattgcggatgatttaggtcgtgagcgtgagcgctat
aaacttccttacggtgcaagcatcttgttgaaagatggtgaagctgtagaagctggcggt
atcgtggcgacttgggatccacatacacatccacttgttaccgaagttgcgggtaaagca
cgtttcagccaaattgctgatggtgtaactgcaacctctaagacagatgatgcgacaggt
atgaccactgttgaaatcttgcctgtaacagctcgtcctgcttctggtaaagatttacgt
cctgcaattgtgttggatacaacagatggcggcgaacaattctacttcttaccacaaaat
acgatcgtaactgttcgcgatggcgcaacgatcggtgtgggtgatgtacttggtcgtgta
ccacaagaaacttcacgtacacgtgatattaccggtggtcttccacgcgtagctgacttg
tttgaagcgcgtaaaccgaaagagcatgcgattcttgcagaagtatcaggtgttgtaagc
ttcggtaaagagactaaaggtaaaaaccgtttagtgattactccggatgatggttctgag
atctacgaagaattgattccaaaatggcgtacgatcaacgtgtttgaaggtgagcatgtg
aaccgtggtgaaaccatttctgatggtccacagaacccacatgacatcttacgtttgaaa
ggtgaagttgcattaaccaactacatcgtgaacgaagttcaagacgtttaccgtctccaa
ggtgtaaaaatcaacgataagcacattgaagttgttgtacgtcaaatgttgcgtaaagtt
gatatcactgatggcggtgatacaagcttcatcaaaggtgagcaagtggattacatccgc
gttgttcaagagaaccaagctgtcttggctcagaacaagttccctgcgaagtttgaacgt
cagttaatgggtatcacgaaagcgtcgctttctactgactcgttcatctctgctgcatcg
ttccaggaaacaactcgtgtgttaactgaagcggctgtaacaggtaaagaagatgattta
cgtggcttgaaagagaacgttgttgtaggtcgcttgatccctgctggtacaggtcttgcg
tatcacctagagcgtcgtcgtcaagaatcagaagctgctgagtttgaacttcacaacgat
ttcagtgaagttgatcaagcatttagtcaagcgttgaactcagaccagttctaa
DBGET
integrated database retrieval system
