Achromobacter denitrificans: APT56_04350
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Entry
APT56_04350 CDS
T04244
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
adt
Achromobacter denitrificans
Pathway
adt00470
D-Amino acid metabolism
adt00550
Peptidoglycan biosynthesis
adt01100
Metabolic pathways
adt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
APT56_04350
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
APT56_04350
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
APT56_04350
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
adt01011
]
APT56_04350
Enzymes [BR:
adt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
APT56_04350
Peptidoglycan biosynthesis and degradation proteins [BR:
adt01011
]
Precursor biosynthesis
Amino acid ligase
APT56_04350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
RimK
TTL
CPSase_L_D2
ATPgrasp_ST
GARS_A
ATPgrasp_YheCD
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ALX82464
LinkDB
All DBs
Position
966263..967213
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AA seq
316 aa
AA seq
DB search
MSAKFGKVGVLYGGRSAEREVSLMSGAGVHQALLSAGVDAHLFDTGERSLAELAAEGFER
VFIALHGRFGEDGSIQGALELLGIPYTGSGPLASALAMDKTMTKRVWLQHGLPTPAFELL
DADTELRLVPDRLSLPLIIKPPHEGSTVGITKVVGYSDMKDAYALAAKFDAEVLAEQFIQ
GRELTVAVLGSGKTARALPVIEIAAPGGNYDYEHKYFSDDTQYFCPAALPPAVAEEVADI
AVRAYRALGCEGWGRADFMLDADNRPWLLEMNTSPGMTSHSLVPMAARATGMSYAELCVA
ILADASCKLHSAARNT
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaaattcggcaaggtgggtgtgttgtacggcggccgttccgccgaacgcgaa
gtgtccctgatgtccggggccggcgtgcaccaggcgctgctaagcgccggcgtcgacgcg
cacctgttcgacacgggcgagcgcagcctggccgagctggccgccgagggcttcgagcgc
gtgttcatcgcgctgcatggccgcttcggcgaagacggctcgatccagggcgcgctggag
ctgctgggcattccctacaccggcagcggcccgctggcgtcggccctggccatggacaag
accatgaccaagcgcgtctggctgcagcatggcctgcccacgccggcattcgaattgctg
gacgccgacaccgaactgcgcctggtgccggaccgcctgagcctgccgctcatcatcaag
ccgccgcacgagggctcgaccgtgggcatcaccaaggtggtgggctattccgacatgaag
gacgcctacgccctggccgccaagttcgacgccgaggtgctggccgagcagttcatccag
ggccgcgagctgaccgtggcagtgctgggcagcggcaagaccgcgcgcgcgctgccggtg
atcgagatcgccgcgcccggcggcaactacgactacgagcacaagtacttctccgacgac
acgcagtacttctgcccggcggcgctgccgccggccgtggccgaggaagtcgccgacatc
gcggtgcgcgcctatcgcgcgctgggctgcgaaggctggggccgcgccgacttcatgctg
gacgccgacaaccgcccctggctgcttgaaatgaatacctcgcccggcatgaccagccat
tcgctggtgccgatggcggcccgcgccaccggcatgagctatgccgagctgtgcgtggcg
attttggccgacgcttcgtgcaaattgcacagcgccgctcgcaatacttga
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