Achromobacter denitrificans: APT56_04825
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Entry
APT56_04825 CDS
T04244
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
adt
Achromobacter denitrificans
Pathway
adt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APT56_04825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adt03019
]
APT56_04825
Enzymes [BR:
adt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
APT56_04825
Messenger RNA biogenesis [BR:
adt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
APT56_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ALX82548
LinkDB
All DBs
Position
complement(1071967..1073352)
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AA seq
461 aa
AA seq
DB search
MITETIKKFVGRLFAPAARGPLRIGRDKHGIDRRNVSRHAIKVCEVLRQHGYEAYIVGGA
VRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPAS
EDQETDAHGRILRDNVFGTHEEDAARRDFTMNALYYDPHNEEVIDFHNGVADLKKRQIRM
IGDPAKRYREDPVRMLRAVRFAAKLNGTIDPATRQPIRTMADLIENVPASRLFDEMLKLL
TCGHAMDCLRQLRADGLHNGLLPLLDVVLEQPGGEHFVELALERTDARVRAGKTISPSFL
FAALLWQQVEVRWKQLRAQGEHTIPALSQAADSVLDEQTEKLAIQRRFSSDMREIWFMQP
RFERRMGKTIFRMIEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANADDATRADMIEE
VSRLPRDASDGPAPAARKRRPRRRSSSRGAGSAAGGAGGAE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgaaaccataaaaaaattcgtcggccgactgttcgcgccggcagcccggggg
cctttgcgcatcggacgcgacaagcacggcatcgaccgccgcaatgtctcgcgccacgcc
atcaaggtatgcgaggtgttgcgccagcatggctatgaagcctatatcgtcggcggcgcg
gtgcgcgacctgatcgtcggcctggaacccaaggacttcgacgtcgccaccaatgccacg
cccgaacagatccgcccgctgttccgccgcgcccgcatcatcggccgccgcttccagctg
gtgcacgtggtgttcggccaggaaatcatcgagacctccaccttccgcgcccccgcctcg
gaagaccaggaaaccgacgcgcacggccgcatcctgcgcgacaacgtgttcggcacgcac
gaggaagacgcggcgcgccgcgacttcaccatgaacgcgctgtactacgacccgcacaac
gaggaagtgatcgacttccacaacggcgtggccgacctgaagaagcgccagatccgcatg
atcggcgacccggccaagcgctaccgcgaagatccggtgcgcatgctgcgcgcggtgcgt
ttcgccgccaagctgaacggcacgatcgaccccgccacgcgccagccgatccgcaccatg
gccgacctgatcgagaacgtgccggcctcgcgcctgttcgacgagatgctcaagctgctg
acctgcggccacgccatggactgcctgcgccaattgcgcgccgacggcctgcacaacggc
ctgctgccgctgctggacgtggtgctggaacaaccgggcggcgagcacttcgtggaactg
gcgctggagcgcaccgacgcccgcgtgcgcgccggcaagaccatcagccccagcttcctg
ttcgccgcgctgctgtggcaacaggtggaggtgcgctggaagcagctgcgcgcccagggc
gaacacaccatcccggcgctgtcgcaggccgccgactcggtgctcgacgagcagaccgag
aagctcgcgatccagcgccgcttctcgtcggacatgcgcgagatctggttcatgcagccg
cgcttcgagcgccgcatgggcaagaccatcttccgcatgatcgaacaaccgcgctttcgc
gccgcctgcgacttcctgcagctgcgcgccgccgccggcgagttcgacagcgtgctggcg
cagtggtggatggacctggccaacgccgacgatgccacccgcgccgacatgatcgaggaa
gtctcgcgcctgccgcgcgacgccagcgacggcccggcgccggccgcgcgcaagcgccgg
ccgcgccgccgctcgtcctcgcgtggcgcgggcagcgccgcgggcggtgccggcggcgcc
gaataa
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