Achromobacter denitrificans: APT56_06520
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Entry
APT56_06520 CDS
T04244
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
adt
Achromobacter denitrificans
Pathway
adt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
APT56_06520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adt03400
]
APT56_06520
Enzymes [BR:
adt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
APT56_06520
DNA repair and recombination proteins [BR:
adt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
APT56_06520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALX86801
LinkDB
All DBs
Position
1461771..1462655
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AA seq
294 aa
AA seq
DB search
MERLWLRPAPQPQAAPAAMPQVAVSKQESPAAPPQVAVSKQESPAPAMPARVGAVPARDA
AAPPAASAVRPAGPGPGLRNGPPPKPAPKAEVVTDAAPAVIPVAEAVKNATLDELREQVV
ACTACGLCGGRRHAVFGHGGQPTRWLVVGEAPGEQEDRQGQPFVGRSGQLLDSMLSAVGM
SRERDVFIANVIKCRPPGNRNPKPEEIAACSPYLMRQIALLKPERILVLGRFAAQTLLGT
DATIGSLRGRVHQMKTEEGREIPVIVSYHPAYLLRSPAEKARAWQDLKLASRQL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcctgtggctgcggcccgcgccccagccgcaggccgcgcccgctgccatgccc
caagtggctgtttccaaacaggaatcgcccgccgcgccgccccaggtggctgtttccaaa
caggagtctccggcgccggcgatgcccgcccgcgtcggggcggtgcccgcccgtgatgcc
gctgcgccgccggcggcctcggcggttcgcccggccggccctggcccgggcctgcgcaat
ggccctccgcccaagccggcgcccaaggccgaggtggtcacggacgccgccccggcggtg
attccggtggccgaagcggtcaagaacgccaccctggacgaactgcgcgaacaggtggtg
gcgtgcaccgcatgcggcctgtgcggcggccgccgccacgcggtgttcggccatggcggc
cagcccacgcgctggctggtggtcggcgaggcgcccggtgaacaggaagacaggcagggt
caacctttcgtgggccgctccgggcagttactggattcgatgctgtcggcggtgggcatg
agccgcgagcgcgatgtcttcatcgccaacgtcatcaagtgccgcccgcccggcaaccgc
aatcccaagcccgaggaaatcgcggcctgcagtccgtacctgatgcgccagatcgcgctg
ctcaagccggagcgcattctggtgctgggtcgcttcgctgcccagacgctgctgggcacg
gacgcgaccatcggcagcctgcgcggccgggtacaccagatgaagacggaagaggggcgc
gagatcccggtgatcgtgagctatcacccggcctatctgttgcgcagtccggccgagaag
gcgcgggcctggcaagacctgaagctggcctcccgccagctgtag
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