Achromobacter denitrificans: APT56_06840
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Entry
APT56_06840 CDS
T04244
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
adt
Achromobacter denitrificans
Pathway
adt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
APT56_06840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adt03019
]
APT56_06840
03009 Ribosome biogenesis [BR:
adt03009
]
APT56_06840
03036 Chromosome and associated proteins [BR:
adt03036
]
APT56_06840
Enzymes [BR:
adt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
APT56_06840
Messenger RNA biogenesis [BR:
adt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
APT56_06840
Ribosome biogenesis [BR:
adt03009
]
Eukaryotic type
90S particles
RNase
APT56_06840
Prokaryotic type
rRNA processing factors
APT56_06840
Chromosome and associated proteins [BR:
adt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
APT56_06840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ALX82908
LinkDB
All DBs
Position
1529835..1530596
Genome browser
AA seq
253 aa
AA seq
DB search
MSLATLENRLDHHFGDPALLEQALTHRSHGARHNERLEFLGDSVLNFVVAAMLFERYAKI
DEGDLSRLRANLVKQASLADIAQRLELSQYLRLGEGELKSGGFRRPSILADTVEALFGAV
FLDAGFDAARRVIVRQYQPVLASVDPKTLGKDAKTLLQEFLQGRKLALPVYTVVATHGAA
HSQQFEVECAIPALEIKVNAPGASRRAAEQSAAKLALEAAQAISPASKAARKSGKARKTA
QLSLPVAVSQETK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctagccacgctagaaaaccggctggatcatcacttcggtgatccagcactgctt
gaacaggcgctgacccaccgcagccatggtgcgcgccacaacgagcgcctggagttcctc
ggggattccgtgctcaacttcgtcgtcgcggcgatgctgttcgagcgttacgcgaaaatc
gacgagggcgatctgtcacgcctgcgcgccaacctggtcaagcaggcttcgctggcggac
atcgcccagcgcctggagctgtcccaatacctgcgcctgggcgaaggcgaactgaagagc
ggcggtttccgccggccgtcgatcctggccgatacggtcgaagccctgtttggcgcggtg
ttcctggacgctggtttcgacgctgcccgccgcgtgatcgtgcgccagtaccagccggtg
ctggcctcggtcgaccccaagaccctgggcaaggacgccaagaccttgctgcaggaattc
ctgcaaggccgcaagctggccttgcccgtgtacaccgtggtggccacgcacggcgccgcc
cacagccagcagttcgaggtcgaatgcgccataccggcgctcgagatcaaggtgaacgcg
cccggcgccagccgccgcgcggccgagcagtcggccgccaagctggcgctggaggcggcg
caggccatcagcccggcgtccaaggccgcccgcaagtcgggcaaggcgcgcaagaccgcg
cagttgtcgctgcccgtggcagtgtcccaagagactaaatga
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