Achromobacter denitrificans: APT56_07260
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Entry
APT56_07260 CDS
T04244
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
adt
Achromobacter denitrificans
Pathway
adt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APT56_07260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adt03021
]
APT56_07260
Transcription machinery [BR:
adt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
APT56_07260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
HTH_24
Rv2175c_wHTH
HTH_11
HTH_IclR
HTH_31
HTH_28
GerE
HTH_10
HTH_40
Fe_dep_repress
TnsD
Motif
Other DBs
NCBI-ProteinID:
ALX82986
LinkDB
All DBs
Position
1626260..1626793
Genome browser
AA seq
177 aa
AA seq
DB search
MSSPLLSSPASCADAPATQVDGLYRDHRPWLFGWLRRKLGCAHRAEDLAQDVFVRVIQGS
KTVRAGEARALLTTIAKGLVIDHQRHAALEHAYLAYLAALPEVHAPSPETQAEQMQALVR
LDRLLDRLPAKARSAFLLSQLDGLTYPEIAQRLGVSLSSVQQYMVRAMSACYAALYD
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttcccccctcctttcgtctccggcctcttgcgccgatgcgcccgccacgcaggtc
gatggcctgtaccgggatcatcggccgtggctgttcggatggctgcgccgcaagctcggc
tgtgcgcatcgcgccgaagacctggcgcaggacgtgttcgtgcgcgtgatccagggcagc
aagacggttcgcgcgggcgaggcccgggcgttgctgaccaccatcgccaaggggctggtg
atcgaccaccagcgccacgcggcgttggagcatgcctatctggcttatctggccgccttg
cccgaggtccatgcgccgtcgcccgaaacgcaggccgagcagatgcaggccctggtgcgg
ctcgatcgcctgctcgaccgcctgccggccaaggcgcgctcggcgttcctgctgtcgcag
ctggacggcctgacctatcccgagattgcccagcggctgggcgtgtcgctcagttcggtg
cagcagtacatggtgcgcgccatgtcggcctgctatgccgcgctttatgactag
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integrated database retrieval system
