Achromobacter denitrificans: APT56_11550
Help
Entry
APT56_11550 CDS
T04244
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
adt
Achromobacter denitrificans
Pathway
adt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APT56_11550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adt03021
]
APT56_11550
Transcription machinery [BR:
adt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
APT56_11550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_11
Sigma70_ECF
HTH_DeoR
Trp_repressor
HTH_24
DUF4771
Motif
Other DBs
NCBI-ProteinID:
ALX83763
LinkDB
All DBs
Position
2564395..2564907
Genome browser
AA seq
170 aa
AA seq
DB search
MSHPAQPTPHPAAQLYEAHHPWLLEWLRRRLGCRHDAADLAHDTFLRVLAGRQTEPIHEP
RAFLTTLAQRTLYTFWRRRELERAYLDSLESLPQACAPSEEQRALVVEALMQIDRALQCL
PARTRHIFLLSQLHELTYPQIAEQLGVSAITVRRGMKQAITLCVAARLAA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcccgcgcagccgacgccgcaccccgccgcccagctgtacgaggcccatcat
ccgtggctgctggaatggctgcggcgccggttgggttgccgccatgacgccgccgacctg
gcgcacgataccttcctgcgggtgctggccgggcgccagaccgagccgatccacgaaccc
cgcgcgttcctgaccacgctggcgcagcgcacgctgtataccttctggcgccgccgcgag
ctcgagcgcgcctatctcgacagcctcgaatccctgccgcaggcctgcgcgcccagcgag
gaacagcgcgcgctggtggtcgaggccctgatgcagatcgaccgcgccctgcaatgcctg
ccggcgcgcacccgccacatattcctcctgagccagttgcacgaactgacctatccgcag
atcgccgagcagctcggcgtgtcggccatcaccgtccggcgcggcatgaagcaggccatc
accctgtgcgtggccgcgcgcttggccgcatga
DBGET
integrated database retrieval system
