Achromobacter denitrificans: APT56_13100
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Entry
APT56_13100 CDS
T04244
Name
(GenBank) LysR family transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
adt
Achromobacter denitrificans
Module
adt_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
adt03000
]
APT56_13100
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
adt01504
]
APT56_13100
Transcription factors [BR:
adt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
APT56_13100
Antimicrobial resistance genes [BR:
adt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
APT56_13100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
ExbD
Sec8_N
MarR_2
Bac_globin
Peptidase_U40
Motif
Other DBs
NCBI-ProteinID:
ALX84050
LinkDB
All DBs
Position
complement(2910855..2911814)
Genome browser
AA seq
319 aa
AA seq
DB search
MDRFDAMQAFARVVETGSFTKAAETLHMSKTSVTQLVQQLEARLRVRLLNRTTRKVNVTA
DGAVYYERVLRLLADMDDAETSLSVAASVPRGRLRVDVPSPLARMILVPALPAFHARYPD
IQLDMGVSDRIVDVIGENVDCVVRGGELTDQSLMARRVGDLQLRVYAAPAYLQRAGAPAH
PRDLEDSHHRIVGFLWSRSGKPLPYAMRRGDERVHAHGRYVVAVDDGNAYLAAGLAGMGV
LWLPDYMAREHAARGELMPLFEDWQQDPMPLYIAFPPNRHVSAKLRVFIDWVAELMAEHA
PLEFARFPPPTTIRQSKRP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtttcgacgcaatgcaggccttcgcccgcgtggtggaaaccggcagcttcacc
aaagcggccgagacgctgcacatgagcaagaccagcgtcacgcaactggtgcagcaactg
gaggcgcggctgcgcgtgcgcctgctcaaccgcaccacccgcaaggtcaacgtcaccgcc
gacggcgcggtctactacgagcgcgtgctgcggctgctggccgacatggacgacgccgaa
accagcctgtccgtggccgcgtccgtgccgcgcgggcgcctgcgggtcgacgtgcccagc
ccgctggcgcgcatgatcctggtgcccgccctgcccgccttccacgcgcgctatccggat
atccagctcgacatgggcgtgagcgaccgcatcgtcgacgtgatcggcgaaaacgtcgac
tgcgtggtgcgcggcggcgaactgaccgaccagtcactgatggcgcggcgcgtcggcgac
ctgcaattgcgcgtgtatgccgcgcccgcctacctgcaacgggccggcgcgcccgcgcat
ccgcgcgacctcgaggacagccaccaccgcatcgtcggcttcctctggtcgcgcagcggc
aagcccctgccctacgccatgcggcgcggcgacgaacgcgtccacgcacacggccgctac
gtggtcgcggtggacgacggcaacgcctatctggcggcgggcctggcgggcatgggcgtg
ctgtggctgcccgactacatggcgcgcgaacatgccgcgcgcggcgagctcatgccgcta
ttcgaggactggcaacaggacccgatgccgctctacatcgccttcccgcccaaccgccac
gtcagcgccaagctgcgggtgttcatcgactgggtggcggaactgatggcggaacatgcg
ccgctcgaattcgctcgcttccccccgcccaccacaatacggcaatcgaagaggccttga
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