KEGG   Achromobacter denitrificans: APT56_13240
Entry
APT56_13240       CDS       T04244                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
adt  Achromobacter denitrificans
Pathway
adt02020  Two-component system
Brite
KEGG Orthology (KO) [BR:adt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    APT56_13240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adt03021]
    APT56_13240
Transcription machinery [BR:adt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     APT56_13240
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 PhyR_sigma-like Sigma70_ECF HTH_23 HTH_11 GerE
Other DBs
NCBI-ProteinID: ALX84074
LinkDB
Position
complement(2941568..2942083)
AA seq 171 aa
MPPGDLPAPHAVDTLYRSHHAWLTAWLRRRLRDDHDAADLAQDTFVRLIAARDTPGLREP
RAFLARIAHGLMVNLWRRRDLEHAYLQALAQRPEACAPSPERRALVLEALVEIDAMLQRL
PARAREAFLLAQLGGYTYAEIGQRLDVSERMVKKYMAQVMLQCLLIADGVW
NT seq 516 nt   +upstreamnt  +downstreamnt
gtgccgcccggcgacctcccggctccccacgccgtcgacacgctctatcgctcgcaccac
gcctggctgacggcgtggctgcggcgtcgcctgcgcgacgaccacgacgccgccgatctg
gcccaggacaccttcgtgcgcctgatcgccgcccgcgacacgccaggcctgcgcgaaccg
cgcgccttcctcgcccgcatcgcccacggcctgatggtcaacctgtggcgccgccgcgat
ctcgaacacgcctatctgcaagccctggcccagcgccccgaggcctgcgcgccctcgccc
gagcggcgcgcgctggtgctggaggcgctggtcgagatcgacgccatgctgcagcgcctg
ccggcccgcgcccgcgaggctttcctgctggcgcaactgggcggctacacctatgccgag
atcggccagcgcctggacgtgtccgagcgcatggtgaagaaatacatggcgcaggtgatg
ctgcaatgcctgctgatcgcggacggcgtctggtga

DBGET integrated database retrieval system