Achromobacter denitrificans: APT56_14665
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Entry
APT56_14665 CDS
T04244
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
adt
Achromobacter denitrificans
Pathway
adt00040
Pentose and glucuronate interconversions
adt01100
Metabolic pathways
adt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
APT56_14665
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APT56_14665
Enzymes [BR:
adt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
APT56_14665
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ALX86926
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All DBs
Position
complement(3276631..3277794)
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AA seq
387 aa
AA seq
DB search
MLYGGAATASESCASPDERCPFVSELLQQREGYGAQATGGLGGRFIEVTSDQDSGPGTLR
AALAQAKKGPTWIRFASDMTIVLDSQLRVPSNTTIDGRGKHVALIDDGLGVYGSRNVILT
HLTIDGRLNRLTQAVNIANNSRDVWVDHMDLSRMSDRLLNVKNGSTDVTISWTKFHNSNK
VMLLNNITSKNLFANYERDSIARVTLHHNYFFNTVQRNPRGQFGTFHLFNNLLENWDFYG
MSFSLEAKALVEGNIFNNDAKRQCVEPEFFPTVEGVKVNYCRYIPTAAKRSALDNGASDE
GAYQDLKAVHGYTRDFKAFLRLKDNLYLGDAKPVLQDYRPEAAPTPPYCYGYEKPSAELA
DRIRKHAGNTSGDTPLPATRVGAGCPR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatggcggcgcggccaccgccagtgagtcctgcgccagtccggacgaacgctgc
cccttcgtttccgaactgctgcagcagcgcgaaggctatggcgcccaggccacgggcggc
ctgggcggccgcttcatcgaggtgacctccgaccaggattccgggcccggcacactgcgc
gccgcgctggcgcaagccaagaaggggccgacctggatccgcttcgcttcggacatgacg
atcgtgctggactcgcagctgcgcgtgccgtcgaacacgacgattgacggtcgcggcaag
cacgtagcgctgatcgatgacgggctgggcgtgtatggcagcaggaatgtcatcctcacg
cacctgaccatcgacggccgcctgaaccggttgacgcaggccgtgaacatcgccaacaac
agccgcgacgtctgggtcgaccacatggacctgtcgcgcatgtccgaccggttgctcaac
gtcaagaacggctccaccgacgtcacgatctcgtggacgaagttccacaattccaacaag
gtcatgctgctcaacaacatcacctcgaagaacctgttcgcgaactacgaacgtgattcc
atcgcgcgggtgacgctgcaccacaattatttcttcaacaccgtgcagcgcaatccgcgg
ggccagttcggcacctttcacctgttcaacaacctgctggagaactgggacttctacggc
atgagtttcagcctggaggccaaggcgctggtcgagggcaacatcttcaacaatgatgcc
aagcgccagtgcgtggagccggagttctttcccacggtggaaggcgtgaaggtcaattac
tgccgctatatccccacggccgccaagcgcagcgcgctggacaacggggcctcggacgag
ggcgcctaccaggatctgaaggcggtgcacggttatacgcgggacttcaaggcgttcctg
cgcctgaaggacaacctctatctgggagacgcgaagcccgtgctgcaggactaccgcccg
gaggccgcgccgacgccgccgtactgttatggctatgagaaaccgtcggccgaactggcg
gaccggatccgcaagcacgcgggcaacaccagcggcgatacgccgctgcccgcgacgcgg
gtgggcgcgggctgcccaagatag
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