Achromobacter denitrificans: APT56_16040
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Entry
APT56_16040 CDS
T04244
Name
(GenBank) excisionase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
adt
Achromobacter denitrificans
Pathway
adt00020
Citrate cycle (TCA cycle)
adt00630
Glyoxylate and dicarboxylate metabolism
adt01100
Metabolic pathways
adt01110
Biosynthesis of secondary metabolites
adt01120
Microbial metabolism in diverse environments
adt01200
Carbon metabolism
adt01210
2-Oxocarboxylic acid metabolism
adt01230
Biosynthesis of amino acids
Module
adt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
adt_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
adt_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
APT56_16040
00630 Glyoxylate and dicarboxylate metabolism
APT56_16040
Enzymes [BR:
adt01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
APT56_16040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
HTH_17
MerR_1
MerR
HTH_23
Sigma70_r4_2
HTH_22
HTH_3
DUF4999
HTH_8
Motif
Other DBs
NCBI-ProteinID:
ALX84574
LinkDB
All DBs
Position
complement(3575401..3576612)
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AA seq
403 aa
AA seq
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MPNYLTSAAAATRLGVSRQTLYAYVSRGLLHAEAGATPRESRYLAEDVERLAAQRTRGRK
PKEVAKATLNWGLPVLESAITLIEDGQLFYRGENAVALAQSSSVEAVAAHLWQCDQAMAF
GAAAPRLPEDLAALFARHRGQRAEAALLPLFTAASDDDATALWQRSPERQAQGCGALVRT
LAACLLQTAPDDAPIHTQCARAWGVDAAGADLIRMALVLCADHELNASSFTARCIASTGA
SLRAGIVGGLAALTGGRHGATTARVEAMWEELERGGGGADAGQRLARGLRERLARGEDMP
GFGHHLYPAGDPRASALLARILPRRPEWETLIEQAFELSGQRPSVDFSLVAVRRHLGLPP
GAAFGLFALGRSIGWLAHGLEQRGSPDVIRPRAAYTGIHPDAA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcccaattacctgacctccgccgccgcggccacccgcctgggggtgtcgcgccagacc
ctgtacgcctacgtcagccggggattgctgcacgccgaggctggcgccacgccgcgcgaa
agccgctacctggccgaggacgtcgaacggctggcggcgcagcgcacccgtggccgcaag
ccgaaagaggtggccaaggcgacgctgaactggggcctgccggtgctggaatcggccatc
accctgatcgaggatggccagttgttctatcgcggtgaaaacgccgtggcgctggcgcaa
tcgtcctcggtggaagcggtggccgcgcatctgtggcaatgcgaccaggcgatggcgttc
ggcgcggccgcgccgcggttgcccgaggatctggcggcgctgttcgcgcgccatcgcggc
cagcgcgccgaggccgcgctgttgccgctgttcacggcggccagcgatgacgatgcgacc
gcgttgtggcagcgctcgcccgagcgccaggcgcagggctgcggcgcgctggtgcgcacg
ctggcggcctgcctgctgcagaccgcgccggacgacgcgccgatccacacgcagtgcgcc
cgcgcctggggcgtggacgcggcgggcgcggatcttatccgcatggcgctggtgctctgc
gccgaccatgaactgaacgcctccagtttcaccgcgcgctgcatcgcgtccacgggcgcg
agcctgcgcgccggtattgtgggcgggctggcggcgttgacgggcggccgccacggcgcc
accacggcgcgcgtcgaggcgatgtgggaggagctggaacgtggcggtggcggcgcggac
gccggccagcggctggcgcggggcttgcgcgagcggctggcgcggggcgaagacatgccg
ggttttggccaccacctttaccccgcgggcgatccgcgcgccagcgccttgctggcgcgg
atactgccgcggcgccccgagtgggagacattgatcgagcaggcgttcgagctgtcgggg
cagcggccctcggtggacttctcgctggtggcggtgcggcgccatctgggcctgccgccg
ggcgcggccttcggcctgttcgcgctgggacgctcgatcggctggctggcgcatggcctg
gagcagcgcggcagccccgatgtgatccggccgcgcgcggcttataccgggattcatccg
gacgcggcctga
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