Achromobacter denitrificans: APT56_17080
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Entry
APT56_17080 CDS
T04244
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
adt
Achromobacter denitrificans
Pathway
adt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APT56_17080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adt03021
]
APT56_17080
Transcription machinery [BR:
adt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
APT56_17080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_24
HTH_23
HTH_40
Sigma70_r4
GerE
MarR
HTH_29
HTH_11
HTH_28
PhyR_sigma-like
MarR_2
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ALX84764
LinkDB
All DBs
Position
3818049..3818534
Genome browser
AA seq
161 aa
AA seq
DB search
MPPPSIEALYVDHHGWLKGWLRRRLGNSFDAADLAHDTFIRLIAREDPPVVREPRALLTT
VAQGVLSNFMRRRKIEDAYLATLAALPEQTAPSPETRAILIETLVELDRRLDALPAPVVK
AFLLSQLDGMKQADIAAELKLSLATVQRHIARAAHCCFFGA
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcccagtatcgaagcgctgtatgtcgaccatcacggctggctcaagggatgg
ttgcgccggcggctgggcaattcgttcgacgccgccgacctggcgcacgacaccttcatc
cgcctgatcgcgcgtgaagacccgcccgtggtacgtgaaccgcgcgcgctgctgacaacg
gtggcgcaaggcgtgctgtcgaacttcatgcggcgccgcaagatcgaggacgcctatctg
gccacgctggccgccctgcccgagcagaccgcgcccagccccgagacgcgcgccatcctg
atcgagaccctggtcgaactggaccgccgcctggacgccctgcccgcgccggtggtgaaa
gccttcctgctgtcgcaactggacggcatgaagcaggcggacatcgccgccgaactgaag
ctgtcgctggccacggtgcaacgccatatcgccagggcagcgcattgctgcttcttcggc
gcctga
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integrated database retrieval system
