Achromobacter denitrificans: APT56_19855
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Entry
APT56_19855 CDS
T04244
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
adt
Achromobacter denitrificans
Pathway
adt03420
Nucleotide excision repair
adt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APT56_19855
03430 Mismatch repair
APT56_19855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adt03400
]
APT56_19855
Enzymes [BR:
adt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APT56_19855
DNA repair and recombination proteins [BR:
adt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APT56_19855
MMR (mismatch excision repair)
Other MMR factors
APT56_19855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
HHH
Motif
Other DBs
NCBI-ProteinID:
ALX85269
LinkDB
All DBs
Position
complement(4478326..4480416)
Genome browser
AA seq
696 aa
AA seq
DB search
MSDQNPAHPSSRPDPLADLNPAQREAAEFGVGGAGDEGPLLVIAGAGSGKTNTLAHRVAH
LILNGADPQRMLLLTFSRRAAQEMERRVGSVLQRVMNLRGTQQAPSLPWAGTFHAIGARL
LRDCAQRIGLSEAFTIHDRGDAEDLMGMVRHELGLSSTKSRFPLKGTCLAIYSRVVNSQT
PVADVLHATFPWCAQWEDELKNLFRAYVAAKQDQQVLDYDDLLLYWAEMMGDAAIAADVG
ARFDHVLVDEYQDTNRLQAAILLAMKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPAQF
PRPARVITLDRNYRSTQPILNASNAVIGLAAERYAKDLWSDRSSSQLPELVTVSDEAGQA
RWVADQVLAQREGGATLKSQAALFRTSSHSAALELELTRRNIPFVKFGGLRFLEAAHVKD
LLSLLRWAENPRGRMAGFRVAQLLPGIGPATAGKLMDAMAQSAEPLRALREFKPGAAAQA
EWGAFADTYAALADPKLRWPADVDLALRWYAGQLERLYDDARVRKTDLDQLVRIAAGYPT
RERFLTELTLDPPDATSDESGAPSRDEDYMILSTIHSAKGQEWKAVYVLNVVDGCIPSDM
STGTAEEIEEERRLLYVAMTRAKERLQLIVPQRFYVHQQTGMGDRHVYGSRTRYITNAML
PLFDHLPKLPDLPAREAKAPQAPSVDVAKRVRNLFA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccagaatcccgcccacccgtccagccgtcccgatcccctggccgacctcaac
cccgcccagcgcgaggccgccgaattcggcgtcggcggcgcgggcgacgagggcccgctg
ctggtgatcgccggcgccggctcgggcaagaccaacaccctggcgcaccgcgttgcccac
ctgatcctgaacggcgccgatccgcagcgcatgctgctgctgaccttctcgcgccgcgcc
gcccaggaaatggagcgccgtgtcggcagcgtgctgcagcgggtcatgaacctgcgcggc
acccagcaggcgccgtcgctgccgtgggccggcaccttccacgccatcggcgcgcgcctg
ctgcgcgactgcgcccagcgcatcggcctgtccgaagccttcaccattcacgaccgcggc
gacgccgaggacctgatgggcatggtgcggcacgaactgggcctgtcgtccaccaagtcg
cgctttccgctcaagggcacctgcctggcgatctactcgcgcgtggtcaacagccagacg
ccggtggccgacgtgctgcacgccaccttcccgtggtgcgcgcaatgggaggacgaactc
aagaatctgttccgcgcctacgtcgccgccaagcaggaccagcaggtgctcgactacgac
gacctgctgctgtactgggccgagatgatgggcgacgcggccatcgccgccgacgtcggc
gcgcgcttcgaccatgtgctggtggacgaataccaggacaccaaccggctgcaggccgcc
atcctgctggccatgaagcccgacggccgcggcctgaccgtggtgggcgacgacgcccag
tcgatctattcgttccgcgccgccacggtgcgcaacatcctcgactttccggcgcagttc
ccgcggccggcgcgggtcatcacgctggaccgcaactaccgctcgacccagcccatcctg
aacgcctccaacgccgtcatcggcctggcggccgagcgctatgccaaggatctctggagc
gaccggtcatcgtcgcagctgcccgagctggtcaccgtcagcgacgaggccggccaggcc
cgctgggtggccgaccaggtgctggcgcagcgcgagggcggcgccacgctcaagtcgcag
gcggcgctgttccgcacctccagccacagcgccgcgctggaactggagctgacccggcgc
aacatccccttcgtcaagttcggcggcctgcgctttctggaggcggcgcacgtcaaggac
ctgctgtcgctgctgcggtgggccgagaacccgcgcgggcgcatggcggggttccgcgtg
gcgcaactgctgcccggcatcggcccggccaccgccggcaagctgatggacgccatggcg
caatcggccgagccgctgcgcgcgctgcgcgagttcaagccgggcgcggcggcgcaggcg
gagtggggcgcgttcgccgacacctacgcggccctggccgaccccaagctgcgctggccg
gccgacgtcgacctggcgctgcgctggtacgccggccagctcgaacggctgtacgacgat
gcgcgcgtgcgcaagaccgacctggaccaactggtgcgcattgccgccggttaccccacg
cgcgagcgcttcctgaccgaactgacgctggacccgcccgacgccaccagcgacgaatcc
ggcgcgccctcgcgcgacgaggactacatgatcctgtccaccatccactcggccaagggc
caggaatggaaggcggtctatgtgctgaacgtggtcgacggctgtatcccgtccgacatg
agcaccggcaccgccgaagagatcgaggaagaaaggcgtctgctgtacgtggccatgacg
cgcgccaaggaacgcctgcaactgatcgtgccgcagcgcttctacgtgcaccagcagacc
ggcatgggcgaccgccacgtctacggctcgcgcacccgctacatcaccaacgccatgctg
ccgctgttcgaccacctgcccaagctgccggacctgccggcgcgcgaggccaaggcgccg
caggcgccgagcgtggacgtggccaagcgcgtgcgcaacctgttcgcgtag
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