Achromobacter denitrificans: APT56_22025
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Entry
APT56_22025 CDS
T04244
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
adt
Achromobacter denitrificans
Pathway
adt03030
DNA replication
adt03430
Mismatch repair
adt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APT56_22025
03430 Mismatch repair
APT56_22025
03440 Homologous recombination
APT56_22025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adt03032
]
APT56_22025
03400 DNA repair and recombination proteins [BR:
adt03400
]
APT56_22025
Enzymes [BR:
adt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APT56_22025
DNA replication proteins [BR:
adt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APT56_22025
DNA repair and recombination proteins [BR:
adt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APT56_22025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
DNA_pol3_tau_5
AAA_22
AAA_16
AAA_14
AAA_18
AAA_2
AAA_5
TsaE
nSTAND3
DSRM_2
RsgA_GTPase
PIF1
AAA_19
Rad17
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ALX85650
LinkDB
All DBs
Position
complement(4960057..4962369)
Genome browser
AA seq
770 aa
AA seq
DB search
MTYLVLARKWRPRSFDTLVGQDHVVRALTHALDTQRLHHAWLFTGTRGVGKTTLSRILAK
SLNCETGITSKPCGVCRACTEIDAGRFVDYLELDAASNRGVEEMTQLLEQAVYAPGAGRF
KVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
DSIVGHLQAVLGEEQVGFEVPALRLIGQAASGSMRDALSLTDQAIAYSAGNLTEDAVRGM
LGTIDQRHLVRLLDALSTGDAKGVLAVADELATRGLSYAGALADLAVLLSRVAIEQRVSG
VMPAEDPLAADIARLAQTLHPDAVQLFYSVAVHSRGELTLAPDEYAGFIMACLRMLALNG
DAGPQTAIEAPATPARQTAEPAVATAQPPQAAPVAAAPVVERVVPVAQPVAPAPAPVATA
PAPSSPASVPQANAAPAAAPAAVAPAAVAPTAVAPTAVATPPVAAPVAAPVATPAQPAAA
SVPPWEDAPTAAGSAQAAVDAAAQPSSPMNTAAPSVPATASPGAAPAVADAPATDASATP
APAKSAPLAVTPAAAAVAPAADDDGPPSWVDEEIPFEAEGGFVPDAGFASDGGFTSDPDD
DFETLASAPSAAPAPPAAPARREGPAPARKRQSRARLADMTSAAWPELAARLPVTGLAAE
LARQSEWAGVQGDAIILRVAVKTLAESESRVRLQTVLCEHFGQGIRLDVDVGAVGEATAH
AVAQAERAARQQAAEDAVAVDPFVQALVADFGAHVVAGSIRHVDSPSAAA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgacttatctggtactggcccgcaagtggcggccgcgatcgttcgataccctcgtggga
caggatcacgtggtgcgcgcgctgacgcatgcgctcgacacccagcgcctgcaccacgcc
tggctgttcaccggcacccgcggcgtcggcaagaccacgctgtcgcgcatcctggccaaa
tcgctcaactgcgaaaccggcatcacttccaagccctgcggcgtctgtcgcgcctgcacc
gagatcgatgccggccgtttcgtcgactacctcgaactggacgcggcctccaaccgcggc
gtcgaggaaatgacccagttgctggagcaggccgtctacgcgccgggcgcgggccgcttc
aaggtctacatgatcgacgaagtgcacatgctcaccgggcacgcgttcaacgcgatgctc
aagacgctggaagagccgccgccgcacgtcaaattcatcctggccaccaccgacccgcag
aagatcccggtcacggtgctgtcgcgctgcctgcaattcaatctgaagcagatgccggcc
gactccatcgtgggccacctgcaggcggtgctgggcgaggaacaggtcggcttcgaggtg
ccggccctgcggctgatcggccaggccgcgtcgggctcgatgcgcgacgcgctgtcgctg
accgaccaggccatcgcctatagcgccggcaatctcaccgaggacgccgtgcgcggcatg
ctcggcaccatcgaccagcgccacctggtgcgcctgctggacgctttgtccacgggcgac
gccaagggcgtgctggcggtggccgacgaactcgccacgcgcggcctgtcgtacgccggc
gcgctggccgacctggcggtgctgctgtcgcgcgtcgccatcgagcagcgcgtgtccggc
gtgatgccggccgaggatccgctggcggccgacatcgcccgcctggcgcagaccctgcat
cccgacgctgtgcaactgttctactcggtggcggtgcacagccgcggcgaactgacgctg
gcgccggacgagtacgccggtttcatcatggcctgcctgcgcatgctggcgctcaacggt
gacgccggtccgcagaccgccatcgaagcgcccgccacgccggcccgccagacggccgag
cccgccgtggccaccgcgcagccgccgcaagcggcgccggtcgccgccgcgccggtggtg
gaacgcgttgtacccgtggcgcaaccggtcgcgcccgcgccggcccccgtggcgacagcc
cccgcgccgtcctcccccgccagcgtgccgcaagcgaacgctgcgccggccgccgcgccc
gcggctgttgcgcccgcggctgttgcgcccacggctgttgcgcccacggcggtggccacg
ccgcctgttgcagcgccggttgccgcacccgtcgccacgcccgcccagccggccgctgcc
agcgtgccgccttgggaagatgcgccgaccgccgccggttccgcccaggcggccgtcgac
gccgctgcccagccgtcgtcccccatgaataccgccgcgccgagcgtgccggccacggca
tcgcccggtgccgcgcccgccgtcgcggatgccccagccacggatgcctccgccaccccg
gcgcccgccaagtcggccccgctggccgtgacgcccgcggccgccgcggtcgcgccggcc
gccgatgacgacggtccgccgtcctgggtcgacgaagaaatcccgttcgaggccgaaggc
ggcttcgtgcctgatgctggcttcgcgtccgacggcggtttcacgtccgaccccgacgac
gatttcgaaacgctggccagcgcgccctcggccgcgcccgcccccccggcggctcccgcc
cgacgcgaaggcccggccccggctcgcaagcgccagtcgcgcgcgcgcctggccgacatg
acctccgccgcgtggcccgagctggccgcgcgcctgccggtcaccggcctggccgccgag
ctggcgcgccagagtgaatgggccggcgtgcagggcgatgccatcatcctgcgcgtggcc
gtcaagacactggcggaaagcgaaagccgcgtgcgcctgcagacggtgctgtgcgaacac
ttcggccagggtatccggctggacgtggacgtcggcgcggtcggtgaagccacggcccac
gccgtggcccaggccgagcgcgcggcgcgccagcaggccgccgaggacgcggtcgccgtc
gatcccttcgtgcaggcgctggtggcggacttcggcgcccatgtcgtggccggttcgatc
cgccacgtcgactctccctccgccgccgcgtaa
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