Achromobacter denitrificans: APT56_23070
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Entry
APT56_23070 CDS
T04244
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
adt
Achromobacter denitrificans
Pathway
adt00220
Arginine biosynthesis
adt00791
Atrazine degradation
adt01100
Metabolic pathways
adt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
APT56_23070
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
APT56_23070
Enzymes [BR:
adt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
APT56_23070
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
HlyD_3
RnfC_N
NQRA_N
GCV_H
ATP-grasp_5
HlyD_D23
DUF2118
Motif
Other DBs
NCBI-ProteinID:
ALX85831
LinkDB
All DBs
Position
complement(5175140..5178775)
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AA seq
1211 aa
AA seq
DB search
MFDTVLIANRGEIAVRAIRTLKRLGIRSVAVYSDPDRNAAHVREADVAVALGGEKAVDSY
LRTDLLLAAARAHGAQAIYPGYGFLSESAEFAEACEAAGIAFVGPTPLQIREFGLKHRSR
ELAAEAGVPMTPGTGLLASLGEALTQAERIGYPVMLKSTAGGGGIGLSRCDNEAELTVAF
DSVQRMGEHFFRDGGAFIERYVDNARHVEVQIFGDGAGRVLALGERDCSVQRRNQKVIEE
TPAPHLPAATRAALLDAAVKLGESVAYRSAGTVEFIYDPARDSFYFLEVNTRLQVEHPVT
EAVTGLDLIECMLRVAAGEPLDLAAMSRAPQGASIEVRLYAEDPLRQFQPSPGVLTEVHF
PEGVRLDGWVATGTEVPPFYDPMLAKLIVHADTREAALDKLADALAHTRLHGIATNLDYL
RQIVTDARFRAGQLSTRFLEGFTYRPAAIEVLEAGTYTSVQDYPGRTGYWDIGVPPSGPM
DDYAFRLANRIVGNAPDAAGIEATLVGPTLRFHGDAIVALTGAECAATLDGAPVPMWQPV
TVRAGQVLATGRALSGCRTYLAVRNGLDVPVYLGSRSTFALGQFGGHAGRTLRVGDMLPL
VRPELPAASAQAPVSAPQAAPAELIPAYGNTWEIGVLYGPHGAPDFFRPEAIEAFFAADW
EVHYNSNRLGVRLTGPKPTWARENGGEAGLHPSNIHDCEYAIGSINFTGDSPVILTRDGP
SLGGFVCPVTIARAELWKVGQVKPGDRIRFVRIDYAEAVAREAAQDRSVEQLRAVAPQVT
TPLAPPATASETIIAALPATGSRPSVSYRQAGDGYLLLEYGDNVLDLALRMRIHLLMEAL
AARPIDGVRELSPGVRSLQIRYDSRVILQQALIARLLEIETQLADVATLKVPTRVVYLPM
AFEDSATLGAVQRYQETVRASAPWLPNNVDFIQRINGLASREDVRRIVFDASYLIMGLGD
VYLGAPCAVPIDPRHRLLTSKYNPARTFTAEGTVGIGGVYMCIYGMDSPGGYQLVGRTLP
IWNKFLKNPVFQDGKPWLLRFFDQVRFYPVSEAELDTLREDFREGRATVRIEEEVFDFAA
HQRFLAEQADSIGAFQARQKTAFDAEVALWKHEDVAVAPAEAAPETQTPLRDGERLVSAD
MCGNIWKIPVQVGQSVAAGDTLVVVEAMKMELSVIAPVSGTVTAIRCVPGKPVNAGDALL
VLAEDATCPVT
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgataccgtcctcatcgccaaccgtggcgaaatcgccgtccgcgccatccgtacc
ctgaaacgcctgggcatccgcagcgttgccgtgtattccgatcccgaccgcaacgcggcc
catgtgcgcgaggccgacgtggccgtggccctgggcggcgagaaggccgtcgacagctat
ctgcgcaccgacctgctgctggcggccgcgcgcgcgcacggcgcgcaggccatctacccc
ggctacggcttcctgtcggagagcgccgagttcgcggaagcctgcgaggccgcgggcatt
gccttcgtcggccccacgccgctgcagatccgcgagttcggcctgaagcaccgctcgcgt
gaactggcggccgaagccggcgtgccgatgacccccggcacgggcctgctggccagcctg
ggcgaggcgctgacgcaggccgagcgcatcggctatccggtgatgctcaagagcaccgcg
ggcggcggcggcatcggcctgtcgcgttgcgacaacgaggccgaactgacggtggcgttc
gacagcgtgcagcgcatgggcgagcacttcttccgcgacggcggcgccttcatcgagcgt
tacgtggacaacgcccgccacgtcgaggtgcagatcttcggcgacggcgcgggccgcgtg
ctggcgctgggcgagcgcgattgctcggtgcagcggcgcaaccagaaggtgatcgaggaa
actcccgcgccgcacctgccggccgcgacccgcgcggcgctgctggacgcggcggtcaag
ctgggcgagtcggtggcctaccgctcggccggcacggtcgaattcatctacgatccggcg
cgcgacagcttctatttcctggaggtcaacacccgcctgcaggtggagcacccggtgacc
gaggcggtgaccgggctggacctgatcgaatgcatgctgcgcgtggcggcgggcgagccg
ctcgacctggccgcgatgtcgcgcgcgccgcaaggcgcgtcgatcgaggtgcggctgtac
gccgaagacccgctgcgccagttccagccgtcgcccggcgtgctgacggaggtgcatttt
cctgaaggcgtgcgcctggacggctgggtcgcgacgggcaccgaggtgccgccgttctac
gacccgatgctggccaagctgatcgtgcacgccgacacccgcgaggccgcgctcgacaag
ctggccgatgcgctggcgcacacccgcctgcacggcatcgccaccaacctggactacctg
cgccagatcgtgaccgacgcgcgcttccgcgccggccagctgtcgacgcgcttcctggaa
ggcttcacctaccggccagcggccatcgaggtgctggaagccggcacctacaccagcgtg
caggattacccgggccgcaccggctattgggacatcggcgtgccgccgtcggggccgatg
gacgactacgctttccgcctggccaaccgcatcgtcggcaacgcgcccgacgccgccggc
atcgaggccacgctggtcgggccgacgctgcgctttcatggcgacgccatcgtcgcgctc
accggcgccgaatgcgccgccacgctcgatggcgcgcctgtgccgatgtggcagccggtc
acggtgcgcgcgggccaggtgctggccacgggtcgcgcgctgtcgggctgccgcacgtac
ctggcggtgcgcaacgggctggatgtgccggtctacctgggcagccgctcgaccttcgcg
ctgggccagttcggcggccacgccggccgcacgctgcgggtcggcgacatgctgccgctg
gtgcgccccgagctgccggccgcgagcgcccaggcgcccgtgagcgcgccgcaggccgcg
ccggccgaactgattcccgcctatggcaacacctgggagatcggcgtgctgtacggcccg
catggcgcgccggacttcttccgccccgaggccatcgaggccttcttcgccgccgattgg
gaggtgcactacaactccaaccgcctcggcgtgcggctgaccggccccaagcccacctgg
gcgcgcgagaacggcggcgaggccggcctgcatccgtccaacatccatgactgcgaatac
gccatcggcagcatcaacttcaccggcgacagcccggtgatcctgacgcgcgacggtccc
agcctgggcggtttcgtctgcccggtgacgatcgcgcgcgccgagctgtggaaggtgggg
caggtcaagccgggcgaccgcatccgcttcgtgcgcatcgactacgccgaggcggtggcg
cgcgaggccgcgcaggaccgcagcgtggagcagttgcgcgccgtggcgccgcaggtcacc
acgcccttggcgccgcccgccacggcctcggagaccatcatcgcggcgctgccggcgacg
ggcagccggccgtcggtgtcgtaccgccaggcgggcgacggctacctgctgctggagtat
ggcgacaacgtgctcgacctggcgctgcgcatgcgcatccacctgctgatggaggcgctg
gcggcgcggccgatcgatggcgtgcgcgagctgtcgccgggcgtgcgctcgctgcagatc
cgctacgacagccgcgtgatcctgcaacaggcgctgatcgcgcggctgctggagatcgaa
acgcagctggccgacgtggcgacgctgaaggtgccgacccgcgtggtctacctgccgatg
gcgttcgaggattcggccacgctgggcgcggtgcagcgctaccaggaaaccgtgcgcgcc
agcgcgccgtggctgccgaacaatgtcgacttcatccagcgcatcaacggcctggcaagc
cgcgaggacgtgcgccgtatcgtgttcgacgccagctacctcatcatgggcctgggcgac
gtctatctgggcgcgccgtgcgcggtgccgatcgatccgcgccaccgcctgctgacgtcc
aagtacaacccggcgcgcaccttcacggccgagggcacggtgggcatcggcggcgtctac
atgtgcatctacggcatggattcgcccggcggctatcaactggtgggccgcacgctaccg
atctggaacaagttcctgaagaacccggtgttccaggacggcaagccgtggctgctgcgc
tttttcgaccaggtgcgtttctatccggtgagcgaggccgaactcgatacactgcgcgag
gacttccgcgagggccgcgccacggtgcggatcgaggaggaggtgttcgacttcgccgcg
caccagcgcttcctggccgagcaggccgacagcatcggcgcgttccaggcgcgccagaag
acggcgttcgacgccgaggtggcgctgtggaagcacgaggacgtggcggtggcgccggcc
gaggccgcgcccgagacgcagaccccgctgcgcgatggcgaacggctagtcagcgccgac
atgtgcggcaacatctggaagattccggtgcaggtgggccagagcgtggcggcgggcgac
acgctggtggtggtggaagccatgaagatggaactgtcggtgatcgcgccggtgtcgggc
acggtcacggcgatccgctgcgtgccgggcaagccggtgaatgccggcgacgcgctgctg
gtgctggccgaggacgcgacgtgccccgtgacctga
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