KEGG   Achromobacter denitrificans: APT56_23965
Entry
APT56_23965       CDS       T04244                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
adt  Achromobacter denitrificans
Brite
KEGG Orthology (KO) [BR:adt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:adt03400]
    APT56_23965
Enzymes [BR:adt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     APT56_23965
    5.6.2.6  RNA 3'-5' helicase
     APT56_23965
DNA repair and recombination proteins [BR:adt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    APT56_23965
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: ALX85987
LinkDB
Position
complement(5362883..5365339)
AA seq 818 aa
MSGARRDGPLLAWFAARGWKPAAFQRETWRRYLAGESGLLHTPTGSGKTLAAFGGPLLEA
LADPAPARAAAGEGPRVLWVTPLRALAADTTRALAQTAADLGLAWTVALRTGDASARDKR
LARQGKADVLVITPESLALLLSYADASQRFRALRGIVVDEWHELLGNKRGVLLQLCLARL
RCLSPGARTWGLSATLGNLDQARAVLLPHAPDSALVAGARPRKIQISTLLPERSRALPWA
GHLGLSQLERVFKRLFDVRATLLFTNTRAQAELWHRALESIWPEAPGTLALHHGSLDPKL
RAAVEQGLRDGTMRCVVATSSLDLGVDFPAVDQVLQIGSPKGVARLLQRAGRARHRPGES
GNVVCVPAQALELIEYAAARQAIARGEIESRPPPVGSLDVLAQHAVTLALGGGFDADTLY
QEVRGTHAYAALDRATWQAVLDFIVQGGRALAKYPDYQRVVRDDDGRYRVHDRRVAFRHR
LSIGTITADGAVAVKYLRGGSLGSVEEGFLARLRRGDRFQFAGRTLELVRLEGMVAYVRR
AKGGDGPVATWQGGRMPLSTQLASEVESLYSHPGTHPEMRAVAPLLRIQAQASALPDRGR
LVAERIGTRRGMHLFLFPFAGRAVHEGIAAMIALRWGRRQANTISYTVNDYGLMLTLAEP
AALDDALLRQLLSPEHMAEDLRDGVNRGEMARRQFREIARVAGLLTPSLPGQAARSLRQV
QASSGLLYDVLRRYDPDHLLLAQAEREVFELQLEAPRLLAALHDCQRRELALCEPRALTP
LSFPLWTESMRGQLSTETWQARVRRAAQQLEKRYERLA
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgagcggcgcgcggcgggacggccccttgctggcctggttcgcggcgcgcggctggaaa
ccggccgcgttccagcgcgaaacctggcggcgctatctggccggcgaatccggcctgctg
catacgcccaccggcagcggcaagaccctggccgcattcggcggcccgctgctggaagcg
ctggccgatccggcgccggcgcgcgcggcggcgggcgaggggccgcgcgtgctgtgggtc
acgccgctgcgggcgctggccgccgacaccacgcgcgccctggcgcagacggcggccgac
ctgggtctggcctggacggtggcgctgcgcaccggcgatgccagcgcgcgcgacaagcgc
ctggcgcggcagggcaaggcggacgtgctagtcatcacgcccgagtccctggcgctgctg
ctgtcctacgccgatgcgtcgcagcgctttcgcgctctgcgcggcatcgtggtggacgaa
tggcacgagctgctgggcaacaagcgcggcgtgctgctgcagttgtgcctggcgcgcctg
cgctgcctgtcgcccggcgcccgcacctggggcctgtcggccacgctgggcaacctggac
caggcccgcgcggtgctgctgccgcatgcgcccgacagcgcgctggttgcgggcgcgcgg
ccgcgcaagatacagatatcgaccctgctgcccgagcgcagccgcgccctgccgtgggcg
gggcacctggggctgtcgcagctggaacgggtcttcaagcgcctgttcgacgtgcgcgcg
accctgctgttcaccaacacccgcgcgcaggccgagctctggcaccgcgcgctggaatcg
atctggcccgaggccccgggcaccctggcgctgcatcacggctcgctcgatcccaagctg
cgcgcggcggtggagcagggcctgcgcgacggcacgatgcgctgcgtggtggccacttcc
agcctggacctgggcgtggatttcccggcggtggaccaggtgttgcagatcggcagcccc
aagggcgtggcgcgcctgctgcaacgcgccggccgcgcccggcaccggccgggcgagtcc
ggcaacgtggtgtgcgtgccggcgcaggcgctcgaactgatcgagtacgccgccgcccgg
caggccatcgcgcgcggcgagatcgaatcccggccgccgccggtcggcagcctggacgtg
ctggcccagcatgccgtcacgctggcgctgggcggcggcttcgacgccgacacgctgtac
caggaagtgcgcggcacgcatgcctatgccgcgctcgatcgcgccacctggcaggcggtg
ctggacttcatcgtgcagggcggccgcgcgctggccaagtatccggactatcaacgggtg
gtgcgcgacgacgacggccgctatcgcgtgcacgaccggcgcgtcgcgttccgccatcgt
ttgtccatcggcaccatcaccgccgacggcgccgtggccgtcaagtacctgcgcgggggc
agcctgggctcggtggaggaaggcttcctggcgcgcctgcggcgcggcgaccgcttccag
ttcgccggccgcacgctggaactggtgcggctggaaggcatggtggcctatgtgcgccgc
gccaagggcggcgatggcccggtcgcgacctggcagggcggccgcatgcccttgtcgacg
cagctggccagcgaagtggagagcctgtattcgcatcccggcacgcatccggagatgcgc
gcggtcgcgccgctgctgcggatccaggcgcaggccagcgcgttgccggaccgggggcgg
ctggtggcagaacgcatcggcacgcggcgcggcatgcatctgttcctgtttccgttcgcc
ggccgcgccgtgcacgaaggcatcgcggcaatgattgcgctgcgctggggccggcggcag
gccaacacgatctcctatacggtcaacgactacgggttgatgctgacgctggccgagccg
gccgcgctggacgacgcgctgttgcgccagctgctcagccccgagcacatggccgaggac
ctgcgcgatggcgtcaaccggggcgaaatggcgcgccgccagttccgcgagatcgcgcgc
gtggcgggcctgttgacgccttcattgcccggccaggcggcgcgctcgctgcggcaggtg
caggcctccagcgggctgctctacgatgtgctgcgccgctacgatccggaccacctgctg
ctggcgcaagccgagcgcgaagtgttcgaattgcagctggaggcgccccgcctgctggcg
gcgttgcacgactgccagcggcgcgaactggcgctgtgcgaaccgcgcgcgctgacgccc
ctgtcgttcccgctgtggaccgaaagcatgcgcgggcaactcagcaccgagacctggcag
gcgcgcgtcaggcgcgccgcgcagcaactggagaagcgctatgagcgccttgcctga

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