Achromobacter denitrificans: APT56_26475
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Entry
APT56_26475 CDS
T04244
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
adt
Achromobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adt03009
]
APT56_26475 (rimO)
Enzymes [BR:
adt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
APT56_26475 (rimO)
Ribosome biogenesis [BR:
adt03009
]
Prokaryotic type
ribosomal protein modification factors
APT56_26475 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
TRAM
YajR_YAM
DUF5005
Motif
Other DBs
NCBI-ProteinID:
ALX86440
LinkDB
All DBs
Position
5921945..5923261
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AA seq
438 aa
AA seq
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MSSPKVGFVSLGCPKALVDSERILTQLRTEGYQVTPEYNDADVVVVNTCGFIDSAKAESL
EAIGEALAENGKVIVTGCMGVEESVIRNVHPSVLAVTGPQQYEEVVRAVHDAAPPKKDHN
PYLDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGDVLSEAERLVK
AGVKELLVISQDTSAYGVDVKYRSGFWNGRPVRTRMTELCTALSEMGVWTRLHYVYPYPH
VDEVIPLMAEGKILPYLDIPFQHASPRILKAMKRPAFEDKTLARIKQWREICPDLTIRST
FIVGFPGETEEDFQYLLDWMQEAQLDRVGCFQYSPVEGAPANLLDNPVPDEIKQERWERF
MELQQSISTARLARKVGREIDVLIDEVDEDGAVGRSAGDAPEIDGCVYVSSDRVLKAGDM
VRVRVTDSDEYDLWADTI
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccccaaagtcggctttgtcagcctgggctgtcccaaagccctggtcgactcc
gaacgcatcctgacccaactgcgcaccgaagggtaccaagtcacgcccgagtacaacgac
gcggacgtcgtggtggtcaacacctgtggtttcatcgacagcgccaaggccgagtcgctg
gaagccatcggcgaggcgctggccgagaacggcaaggtcatcgtcaccggctgcatgggc
gtcgaggaatcggtgatccgcaacgtgcaccccagcgtgctggccgtgaccggcccgcag
caatacgaggaagtggtgcgcgccgtgcacgacgccgcgccgcccaagaaggaccacaat
ccctacctcgacctggtgccgccgcagggcgtcaagctgaccccgcgccactacgcctac
ctgaagatctcggaaggctgcaatcaccgctgcagcttctgcatcatcccgtcgatgcgc
ggcgacctggtcagccgcccggtgggcgacgtgctcagcgaagccgagcgcctggtcaag
gccggcgtcaaggaactgctggtgatctcgcaggacaccagcgcctacggcgtcgacgtc
aagtaccgcagcggcttctggaacggccgcccggtgcgcacccgcatgaccgaactctgt
acggccttgtccgaaatgggcgtctggacgcgcctgcactacgtgtatccgtatccgcac
gtggacgaagtgattccgctgatggccgagggcaagatcctgccctacctggacatcccg
ttccagcacgccagcccgcgcatcctcaaggccatgaagcgtccggcattcgaggacaag
acgctggcgcgcatcaagcagtggcgcgagatctgccccgacctgaccatccgctcgacc
ttcatcgtcggcttccccggcgaaaccgaggaagacttccagtacctgctggactggatg
caggaagcccagctcgaccgcgtcggctgtttccagtattcgccggtggaaggcgcgccc
gccaacctgctcgacaatccggtgccggacgagatcaagcaggaacgctgggaacgcttc
atggaactgcagcaatcgatttccaccgcgcgcctggcgcgcaaggtcggccgcgagatc
gatgtgctgatcgacgaggtggatgaagacggcgccgtgggccgcagcgccggcgatgcg
ccggaaatcgacggttgcgtctacgtcagttcggaccgcgtcctcaaggccggcgacatg
gtgcgcgtgcgcgtcaccgactccgacgaatacgacctctgggccgacacgatctaa
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