Achromobacter denitrificans: APT56_27020
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Entry
APT56_27020 CDS
T04244
Name
(GenBank) RNA helicase
Organism
adt
Achromobacter denitrificans
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALX86540
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Position
6041955..6043730
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AA seq
591 aa
AA seq
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MSFENLGLAPALLSALQEAGFTTPTTVQASAIPQALAGHDLMVSSQTGSGKTAAFMLPAL
HRIAQMPANKGVGVQVLVLAPTRELALQVTEATATYGRKLADLRTATVVGGMPYGAQLKA
LSRRVDVLVATPGRLIDHLNSGRVKLNTVHTLVLDEADRMLDMGFIEDIETIISRLPAER
QTLLFSATLDGTVAKLAARMMRDPQRIEVAGAKEKHTNITQSLLYADDASHKMQLLDHVL
RDASLDQAIVFTSTKRGADDLADHLADQGFAAAALHGDMNQRQRTRTLSQLQRGQLRILV
ATDVAARGIDVQGISHAVNFDLPMQAEDYVHRIGRTGRAGRNGLAFTLATHSERHKVRRI
EHYIGQSITPEVIAGLEPKRTPRPSTGGAPRGGKPFGKRPGGFGGGYQGHREGGSREGRS
FGGPRGEFKPREGGYQGAREGGGYQGNRPFGDRPARSFGDRPSFGDRPQREGGYQGNRPF
GDRPPREGGFRGGDRDSRPSFSDRPSFGDRPQRDPRPFNERGPREGGFRGGDRDSRPSFS
DRPSFGDRPQREGGFRGGDRSEGGFRDRPSFDKRPGGPAKRFNKPAGARRG
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaaaacctgggcctcgcgcccgccctgttgtcggccctgcaagaagctggc
ttcaccacccccaccaccgtgcaagcctcggccattccgcaggcgctggccggccacgac
ctgatggtgtcgtcgcagaccggtagcggcaagaccgccgccttcatgctgccggcgctg
caccgcatcgcccagatgcccgccaacaagggcgtcggcgtgcaggtgctggtgctggcg
ccgacgcgcgaactggccctgcaggtcaccgaagccaccgccacctacggccgcaagctg
gctgacctgcgcaccgccaccgtcgtcggcggcatgccctacggcgcccaattgaaggcg
ctgtcgcgccgcgtcgacgtgctggtggccacgcccggccgcctgatcgaccacctgaat
tcgggccgcgtcaaactcaataccgtgcacacgctggtgctggacgaagccgatcgcatg
ctggacatgggcttcatcgaggatatcgagaccatcatcagccgcctgccggccgagcgc
cagacgctgttgttctcggccacgctggacggcaccgtggccaagctggccgcccgcatg
atgcgcgatccgcagcgcatcgaagtcgccggcgccaaggaaaagcacaccaacatcacg
caaagcctgctgtacgcggacgacgccagccacaagatgcagttgctggaccacgtcctg
cgcgacgcttcgctggaccaggccatcgtctttacgtcgaccaagcgcggcgccgacgat
ctggccgaccacctggccgaccagggctttgccgccgccgccctgcacggcgacatgaac
cagcgccaacgcacccgcacgctgtcgcaactgcaacgcggccagctgcgcatcctggtc
gccaccgacgtggccgcccgcggcatcgacgtgcaaggcatcagccacgccgtcaacttc
gacctgccgatgcaggccgaagactacgtgcaccgtatcggccgcaccggccgcgccggc
cgcaacggcctggcgttcacgctggccacgcactccgagcgccacaaagtgcgccgcatc
gagcactacatcggccagtccatcacgcccgaagtgatcgccggcctggaacccaagcgc
accccgcgtccctcgaccggcggcgcgccgcgcggcggcaagccgtttggcaagcgtccg
ggcggcttcggcggcggctaccagggtcaccgtgaaggcgggtcgcgcgaaggccgttcg
ttcggcggcccgcgtggcgaattcaagccgcgcgaaggcggttaccagggcgcccgcgaa
ggcggcggctaccaaggcaaccgcccgttcggcgaccgcccggcccgttcgttcggcgat
cgtcccagcttcggtgatcgtccccagcgcgaaggcggctaccagggcaatcgtcccttt
ggcgaccgccccccgcgtgaaggcggcttccgtggcggcgatcgtgattcgcgcccgagc
ttcagcgaccgccccagcttcggcgatcgcccgcagcgcgatccgcgtccgttcaacgag
cgcggcccgcgtgaaggcggcttccgtggcggcgaccgcgattcgcgcccgagcttcagc
gatcgccccagcttcggcgaccgtccgcagcgcgaaggcggcttccgcggcggcgaccgc
tcggaaggcggtttccgtgaccgtcccagcttcgacaagcgccccggcggccccgccaag
cgcttcaacaagccggccggcgcccgccgcggctaa
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