Arachis duranensis: 107458017
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Entry
107458017 CDS
T04300
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107458017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107458017
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107458017
mRNA degradation factors
5'-3' decay
Decapping complex
107458017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_HPS5
PEP5_VPS11_N
FlgN
Motif
Other DBs
NCBI-GeneID:
107458017
NCBI-ProteinID:
XP_020990878
UniProt:
A0A6P5N6X7
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All DBs
Position
1:4314399..4323813
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AA seq
1224 aa
AA seq
DB search
MGMLSAANAAAAALNRVASSKVPRGRRLTGDHVVYDVDVRLTKEVQPQLEVAPITKYGSD
PNLVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLKGHNQRVTDLAFFAEDVHLLAS
VGTDGRVFVWKISEGPDDEDKPQITANIVIAIQMVGEEKVENPRICWHCHKQEILIIGMG
RHVLRIDTTKVGNGEAFVTEDTLRCPLDKLIDGVQLVGTHDGEVTDLSMCQWMRNRLVSA
SHDGTIKIWEDRKTQPLAVMRPHDGHPVFSATFFTAPHRPDHIVLITGGPQNREVKLWVS
ASEEGWLLPSDAESWKCTQTLELRSSAQPSVKDSFFNQVAALSHAGLLLLANAQRNAIYA
VHLEYGSNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDL
AQCLPPPFENVGLEKPDSSVSRDADGFSTVDSSGVRASEMSSASSAPKTMSQGGSTESAL
AGRYPLSSGYIEGPTSAPSSSDANIVCVPSPPLPLSPRLSRKLSDFRSSQSNLGDHVGDQ
SINDYSVDRQMPTIHRNLSDAPLMNNDLKNDEKVKQDDISSVLNPSVMFKQPTHLVTPSE
IIKASSPPETNIIDRNSEGDTKIPDVVDLGNAEVEVKVVGEATPDQSDEYNHQGSQQNLL
SDVKEKYFCSQASDLGIEMTRECCAISGGTYITGEPGQVDLSLGESLSQTSNAGEDGLQD
STKDVHEKISNSSASMTVPPSPAPNTKGKRQKGKNSQASGPSSPSPSACNSVDLSNEVGG
SSNLPSAENAFHQILAMQESINQLLTMQKEMQKQMTMMVTVPVTKEGRRLEAALGRTMEK
AVKANMDVLWARIQEENAKNEKLLRDRIQHVTGLISNFMNKDLPAILEIILKKEIASVGP
AAVHAMTPTIEKIISSAIVESFQRGVGDKAVNQLDKSVNAKLEATVARQIQAQFQTTGKQ
VLQDSLKSSFEISVVPAFEKSCKAMFDQVDSTFQKGMVEHSTAVQQRLESGHTSLAMTLR
ESINSASSVTQTLSREVLEGQRKLMAYATAGANSGTLNPLPIQLNNGPLLREKVEVPLDP
KQELARLITERKFEEAFTGALKRSDVSIVSWLCSQVDLHGLLSMVPLPLTQGVVLSLLQQ
LACDINNDTSRKIAWMMDVAAAINPSDPMIAMHVRPIFEQVYQMLNHQRSLPTMTGPDLS
SIRLLLHVIHSMLMTFSSFLEVCN
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggggatgttatctgccgcgaacgctgcggcagctgcgctgaatcgcgtggcgagcagt
aaggtgccgagagggaggcgcctgacgggggaccatgttgtgtatgacgtggacgtgagg
cttaccaaggaggtgcagccgcagcttgaggtggcgccgataacgaaatatggttcggat
cctaacttggttcttggaaggcaaatagctgttaacaagtcttacatttgctatgggttg
aagcaagggaacattagagtgcttaatattcacacagctgttaggtcccttctcaaaggc
cacaatcagagggtcacagacttggctttctttgctgaagatgttcatctcctggctagt
gttggaacagatggccgtgtctttgtgtggaagatctctgaaggtcctgatgatgaagat
aagcctcaaattactgccaatattgttatcgctatccaaatggtgggagaggagaaagtt
gaaaatcctcgaatctgctggcactgccacaaacaagaaattttgataattggtatggga
agacatgttctaagaattgacaccacaaaagttggaaatggtgaggcctttgtgacagag
gacactctgaggtgtcctcttgacaagctcatagatggtgttcagctggtgggaacacat
gatggagaggtgactgatttgtcaatgtgccaatggatgagaaatcgtctggtatctgca
tcacatgatggcacgataaagatctgggaagatcgcaagacacagccacttgcggtgatg
agaccacatgatgggcatcctgttttttctgctacatttttcactgctccccaccgacct
gatcatattgttcttataactggtggacctcaaaatcgggaagttaagctttgggtctca
gcaagtgaagaaggttggctacttccaagtgatgctgaatcatggaaatgcacgcagaca
ttggagttgaggagttcagctcaaccatctgttaaggactcattctttaatcaagttgca
gcattgtctcatgcaggtctgcttttacttgcaaatgctcagaggaatgctatatatgct
gtacacttagaatatggttctaatcctgaatcaacacgcatggattatatagctgagttt
actgtgaccatgcccattctgagttttactgggacaagtgatatattacctcatggtgaa
catattgttcaggtttattgtgttcaaacacaggccattcagcagtatgctttggattta
gcccaatgcctgccaccaccatttgaaaatgtgggactagagaagccagattcctctgtt
tcccgagatgctgatggattcagtactgtggactcatctggtgttagagcatctgaaatg
tcgtcagccagttctgctcccaaaacaatgtcacaaggtggtagcactgagagtgcactt
gctggaagataccctttaagctctggctatattgagggacctacttcggctccatccagt
agtgatgctaatattgtttgtgttccatctccgcctcttcctttgagcccaaggttgtct
aggaaactgtctgatttcaggagttcacaatctaatttgggtgaccatgttggggaccaa
tccattaatgattattcagttgacagacaaatgcctactattcataggaacttgtctgat
gcaccactgatgaataatgatttgaagaatgatgagaaagtcaaacaggatgatatttcg
agcgtacttaatccctctgttatgtttaagcaaccaactcacctggttactccttctgaa
atcattaaggccagttctccccctgagacaaatataattgatagaaatagtgaaggagat
acaaagatcccagatgtggttgatttgggtaatgctgaagtagaagtgaaggtggtcggt
gaggctacacctgatcagagcgatgagtataatcatcagggatcacaacaaaacctactt
tctgatgttaaagaaaaatacttttgctctcaggcttcagatcttggtattgagatgacg
cgagaatgctgtgcaatatcagggggaacttatattacaggggaaccagggcaagttgat
ctcagtttaggggaatcactttcccaaacttctaatgctggtgaggatggactgcaagac
tcgacaaaagatgtgcacgaaaagatttctaactcatctgcatccatgacagtaccacct
tcacctgcacctaacacaaaagggaagagacagaagggcaaaaattctcaagcatctggt
ccatcttccccatctccaagtgcatgcaattcagttgatttgtcaaatgaagtaggtgga
agttcaaacctcccatctgctgaaaatgcatttcatcaaattctagcaatgcaagaatca
attaatcagttattgactatgcaaaaagagatgcagaagcaaatgacaatgatggttaca
gttccagttacaaaagaaggtagaaggcttgaggcagccctggggagaactatggaaaaa
gctgtcaaggccaatatggatgttttgtgggctcgaattcaagaggagaatgcaaaaaat
gaaaagttgttacgagatcgtattcagcatgttacaggtttgattagtaactttatgaat
aaggatctaccagcaatattggagataatactaaagaaggaaatagcttcagtgggtcca
gctgcagtccatgcaatgacccccactattgagaaaataatatcttcagccattgtagag
tctttccagagaggagtaggtgataaggcagtaaatcaacttgataaatcagtcaatgca
aaacttgaagccactgttgccaggcaaattcaagcacagtttcagacgactggaaaacaa
gtgcttcaggattcactcaaatccagttttgaaatatcagtggttcccgcatttgagaaa
tcatgcaaagcaatgtttgaccaagttgattctacatttcaaaagggcatggttgaacat
tcaactgcagtgcaacaacgccttgaatctgggcacacttcactggcaatgactctaagg
gaatccattaattcagcttcatcagttactcaaactttgagtagagaagtgctagagggc
cagagaaagctaatggcatatgcaactgcaggagctaactctggcacactaaatcctttg
cccattcagctgaacaatggacctctgcttcgtgaaaaggttgaagtgcctctcgatccc
aaacaagagctagcaaggttgataactgaacggaagtttgaggaagctttcaccggggct
ctaaaaagaagtgatgtgtcgattgtatcttggttatgttctcaggttgatttacatgga
cttttgtcaatggttcctcttcctttgacccaaggagtagtgctttcacttctgcagcaa
ctggcatgtgatattaacaatgatacctcacgaaagattgcatggatgatggatgtggct
gctgccattaatccctcagaccccatgattgcgatgcatgtgcgacccatatttgagcaa
gtttatcagatgctgaatcatcaacgtagcttgcctacaatgactggacctgatctttca
agcatccgtcttttattgcatgtcatccactctatgctcatgacattttcctcatttctg
gaagtgtgcaattag
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integrated database retrieval system
