Arachis duranensis: 107458559
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Entry
107458559 CDS
T04300
Name
(RefSeq) protein PAT1 homolog
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107458559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107458559
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107458559
mRNA degradation factors
5'-3' decay
Decapping complex
107458559
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
107458559
NCBI-ProteinID:
XP_015932250
UniProt:
A0A6P4B171
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Position
A07
Genome browser
AA seq
885 aa
AA seq
DB search
MVDMDVFGAGGDLGAAPSTQDLRQLGGASSEGAVFDASQYAFFGKDAVQEVELGGLEDDD
YLPPVESKEDFFFNRDEAEDVRSLSDIDDLTTTFMKLNKNVSGPRSPGVIGDRGSRENST
SEWPQRDDMNWPDHMNAYDSEGSLDGKRWSSHPHSSLAHLNEPKPLYRTSSYPDQQRQPQ
QYQLQHRSSEPVANWLDQLFYETETSQDGKRWSSQPHSSFPQLQESKPLYRTSSYPEKQP
ELTRYSSEPILVPKSSFTSFPPPGGRSQQTSPSHSASHLNISYHAGGAQMGLSSQNLSHL
SNSALQLSGLNHGSHFGGNMRQFPTGSALQRIQNQLVNQAALYPGDHSNLLSNMLQQQLH
LHNGSISPHLMTQLQQQQHRLHHPVQQSASYLSGFKSHLFNPHLSSSSSLGKYEHMLGLG
DVRDHRPKSNQKGKHSLRFSQQNSDASSQKSESGSLQFRSKYMTSDEIESILRMQHAVTH
SNDPYVDDYYHQACLAKKAPVAKSKNLFCPTQIREVPARSRSNSDQHAFLQVDAMGRITF
SSIRRPRPLLEVDPPNSSVTSSSEQGISEKPLEQEPMFAARVTIEDGLCLLLDVDDIDRF
LKCNQLQDGGSQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDVVFLRLVSIAKG
RKLLAKYLRLLLPGSELMRIVSMAIFRHLRFLFGGLPADPASLETTSNLAKIVCQCVQGM
DLGALSACLAAVVCSAEQPPLRPLGSSAGDGASLILVSVLERATELLTDHHAACNYNMGN
RSFWQASFDEFFGLLTKYCMNKYQSIMQSLLIQNPANVDDIGSDAAKAISKEMPVELLRA
SLPHTDDRQRKLLLDFAQRSVPVVGFNNNAGSSGGSHVNSETVLS
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggtggatatggatgtttttggagctgggggtgatcttggagcagctcctagcacacag
gatcttaggcaattagggggtgcttcctcagaaggagcagtttttgatgcatcacaatat
gcgttctttggtaaagatgctgtccaggaagttgaattgggagggttagaagatgatgat
tatttgcctccagttgaatctaaagaggatttctttttcaatagagatgaggctgaggat
gtaagatcgctttccgacattgatgatctcaccactacttttatgaagttgaacaagaat
gtgagtggaccaagaagtccaggagttattggcgatcgaggatcacgagaaaattcgact
tctgaatggccacaaagggatgatatgaactggcctgaccacatgaatgcttatgatagt
gaaggttctctggatggcaaaagatggtcatcgcatccccattcttctctcgcccattta
aatgaacctaagcccttgtacagaacgtcttcctatcctgatcagcaaaggcagccacaa
caataccaactccagcatcgctctagtgaacccgttgctaactggcttgatcaacttttt
tatgaaactgaaacatctcaggatggcaaaagatggtcatcacagccacattcctccttc
cctcagctacaagaatcaaagcctttgtacagaacatcttcatatcctgaaaagcagccg
gagcttactcgttattccagtgaaccaattttggtaccaaagtcttcatttacttctttt
cctcctcctggtggcaggtctcagcagacttctcctagtcatagtgcaagccacttgaac
atttcatatcatgctggaggagctcagatgggactttcatctcaaaatctatctcatctt
tctaattctgcactacagttgagtggattaaaccatgggtctcattttggtggaaacatg
cgccagtttcctactggttctgctcttcagcgaattcagaatcaactggtcaaccaggca
gcgttatatcctggagatcattcaaaccttcttagtaatatgttgcagcagcaattacac
cttcacaatggatcaatatctccacacttaatgactcaattacagcaacagcaacacaga
ttgcatcatcctgttcagcaatctgcaagctatttatcaggtttcaagtcccatttattt
aacccccacctttcttctagctcgtctcttggaaaatatgaacatatgctcggtctgggt
gatgttagagatcatagaccaaaatcaaatcaaaaaggaaaacatagtctccgtttctcc
caacagaattctgatgccagtagccagaagagtgaaagtggttcattacagtttaggtcc
aaatatatgacaagtgatgaaattgagagtattcttagaatgcagcatgctgtgactcat
agtaatgacccgtatgtggatgactattatcaccaagcttgtcttgcaaaaaaggctcct
gtggcgaagtcaaaaaatttgttttgcccaacccagataagggaagttcctgctcgatct
cgttctaattctgatcagcatgcttttctccaggttgatgccatgggtaggattacattc
tcatctattcgacgccctcggcctcttttggaggttgatcctccaaactcttctgttacc
agtagctctgagcaaggcatttcagaaaagcctcttgaacaggagcctatgtttgcagct
agagtcacaattgaggatggtctgtgtttgctccttgatgtagatgatattgatcgtttc
ctaaagtgtaatcagctacaagatgggggaagccaattaagacgaagacgacaggtcctg
ttggaaggattagcaacttcacttcagcttgttgacccactggggaaaaatggacataaa
gttggacttgctgctaaggatgatgtagttttcttgagattagtatctattgccaaggga
cgtaagctccttgcaaagtatcttcggttgcttcttcctggtagtgaacttatgaggata
gtctctatggcaatcttccgtcatctaagattcttatttggtggtctccctgcagatcca
gcatctttggagactacaagtaaccttgccaaaattgtctgccaatgtgttcaaggaatg
gatcttggtgctctcagtgcttgtcttgcggcagttgtttgttctgcggagcagcctcct
cttcgtcctcttggaagctctgctggagatggggcttctcttattttagtatctgttctt
gagagggctactgaacttctaactgatcatcatgctgcatgcaactacaatatgggtaat
cgttcgttttggcaggcctcatttgatgaattctttggccttctgacgaagtattgcatg
aataaataccaaagtatcatgcaatccctgcttatacaaaatccagcaaatgtcgatgac
attggatcggatgcagctaaagcaattagtaaggaaatgcctgttgaactccttcgtgca
agtctccctcacactgatgaccgccagcggaagttattactggatttcgcacagcgctcg
gttcctgtggttggatttaacaataatgcaggcagtagcggcggcagtcatgtgaactca
gagacagtgctaagttga
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