Arachis duranensis: 107458627
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Entry
107458627 CDS
T04300
Name
(RefSeq) uncharacterized protein LOC107458627
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
adu
Arachis duranensis
Pathway
adu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107458627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107458627
03019 Messenger RNA biogenesis [BR:
adu03019
]
107458627
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107458627
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107458627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Cellulase-like
Motif
Other DBs
NCBI-GeneID:
107458627
NCBI-ProteinID:
XP_015932327
UniProt:
A0A6P4AX07
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Position
7:68945752..68951174
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AA seq
592 aa
AA seq
DB search
MSAPNHQIPLQNNGMGMQNQPQMGAANQLNQNLMPPYVSNMQPSMNTHQFMNAANHLLPL
QNNQLHMSNMGMSVPLQGPSHAGFGPQNGVSNAGYNPMFQAQGQVMHNAAQINLSQLQGH
ILAQSILSMLQQPNMNMNIPNGQFSSQFPVQNMNQQLPMQVPNPSQVGLHGMHPGSGPMF
GFPGQVPQAMVSQNPMFSATLHTGLVQGNQARPQFDQNEKSLVLPNGNTNAFVSSSFSSM
QLQGNSSASHAQTNVNSNTKSNDRNSSWKGSQSKNFKNKQTRGGFEGRFQKCKFPKEHRD
KGPNNGRIEHQQKPKFSLNYKEQQQEPKRSFFVTYTDQEIQQWREARRKNHPFNNIQKKQ
SDHTSSPKVDRVVLQRELKQVLAKQAELGVEVAEIPSYYLKDRQNQGSQIEGKDTLTNKK
RKFQNKFDRKPDRKGRFSKKQKFTDKDSLEQRPSITKKKPTLLQKLLSADIKKDRSHLIQ
AFRFMVTNSFFKYYPDKPLIYPSVVVKETGSEGNAGEKHLHAGKDVLDHDNKKTVKKIVN
DDINDVHFSEEEKSDDDDYENLQKEPSSLVQRQRDNGIGIEKCDEEEGEIID
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcctaaccatcaaattccattgcaaaacaatggcatggggatgcagaaccag
cctcaaatgggtgcagccaaccaactaaaccaaaacttgatgccaccctatgtgtcaaac
atgcaaccatcgatgaacacacaccaattcatgaatgctgctaatcatctccttccattg
caaaataaccagttgcatatgtctaatatgggtatgagtgtgcctctgcagggtccatcc
catgcaggatttggtccccaaaatggtgtgagcaatgctggttacaatccaatgtttcag
gctcaaggacaagtcatgcacaatgcagctcaaatcaatttgtctcaactccaggggcat
attctagcacaaagtattctgagcatgcttcagcagcctaatatgaatatgaatatacct
aatggtcaattttcttctcaatttcctgtgcaaaatatgaatcagcagttacctatgcaa
gtgccgaatccttctcaagttggtctgcatggtatgcatcctggttctggccccatgttt
ggctttccaggtcaagtgcctcaggccatggtttctcaaaatccaatgttttctgcaaca
ctgcatacgggtctagtgcaaggaaatcaggccaggccacagtttgaccagaatgagaaa
agcctggttctaccaaatgggaacacaaatgcctttgtctcatcatctttttcatctatg
cagttgcaggggaatagttctgcatcacatgcacaaacaaatgtgaatagcaataccaaa
agtaacgatcgaaattctagctggaaaggatcacaaagcaaaaacttcaaaaataaacaa
actcgaggggggtttgaaggaagattccagaagtgtaagtttcctaaagaacatagggac
aaagggccaaacaatggaagaatcgaacatcagcagaaaccaaaattcagtttgaattat
aaggaacaacagcaggaaccaaaaagatcattctttgtaacttacactgaccaagaaatc
caacaatggcgggaagctcggaggaagaatcatcctttcaacaacatccagaagaaacag
agtgatcatacgagtagccccaaggtggatagggttgtcttacaaagagagctcaagcag
gttttagctaagcaagctgagttgggagttgaagttgctgaaatcccatcctactatctg
aaagatcgtcaaaatcaaggttctcagattgaaggaaaagacacacttaccaacaaaaag
aggaaattccagaacaagttcgacaggaaacccgacagaaaaggtcggttctccaagaaa
cagaagtttacagacaaagattccttagaacaacgaccttctataaccaagaagaagcca
actttattgcagaaactcctgagtgctgatataaagaaggataggagtcacctgattcag
gctttcaggttcatggtaacaaattccttctttaaatactatccagataagccactgata
tatccatcagtggttgttaaagaaaccgggtctgaaggcaatgcgggagagaaacatttg
cacgctggaaaagatgttcttgaccatgataacaagaaaacggttaaaaaaattgtaaat
gacgacattaatgatgtccatttcagtgaagaggaaaagagtgatgatgatgattatgaa
aatctgcaaaaagaaccgtcttccttggttcaaaggcaacgtgataatggaataggcatt
gagaaatgtgacgaagaagagggagaaatcatagattga
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