KEGG T04300: 107459912

Arachis duranensis: 107459912

Entry

107459912         CDS       T04300

Name

(RefSeq) probable CCR4-associated factor 1 homolog 6

K12581

CCR4-NOT transcription complex subunit 7/8

Organism

adu Arachis duranensis

Pathway

adu03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:adu00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107459912
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adu03019]
    107459912
Messenger RNA biogenesis [BR:adu03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107459912
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     107459912

SSDB

Motif

Pfam:

CAF1

Other DBs

NCBI-GeneID:

107459912

NCBI-ProteinID:

XP_015933705

UniProt:

A0A6P4AZF5

LinkDB

Position

7:complement(78493400..78495013)

AA seq 273 aa
MPPVDSVEIREVWNHNVEEEFSIIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYDFHYQ
TLKENVDMLKLIQLGLTFSDEQGNLPRCGTSDAPCIWQFNFREFNLNEDVFANDSIELLR
QSGIDFQKNNADGIDARRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCQNLPET
QTGFFNLINLYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTSST
FRKLKENFFSGSLQKYAGVLYGLGVENAQNTTH

NT seq 822 nt +upstreamnt +downstreamnt
atgcctcctgtcgattcggtcgaaattagggaggtttggaaccacaatgtggaggaggaa
ttctccattatccgtgagatcgtggacgattacccttacatcgccatggacacggagttc
ccgggaatcgtcctccgccccgtgggaaacttcaagaacagttatgattttcattaccag
acgctgaaggagaacgtggacatgttgaagctcatccaattggggctgaccttctccgac
gagcagggcaacctccctagatgcggcacctccgacgccccctgcatctggcagttcaac
ttccgcgagttcaacctgaacgaggacgtcttcgcgaacgactccatcgagctcctccgg
cagagcggcatcgatttccaaaagaacaacgcggacggcattgacgcccggcgttttggg
gagctgctgatgtcgtccgggatcgtgttgaacgacaatgtgcattgggtgacgttccac
agcggttatgatttcgggtacctgctgaagctgctgacgtgtcagaacctgccggagacg
cagacggggttcttcaacctcatcaatttgtatttccccaccgtctacgacattaagcat
ctcatgaagttctgcaacagcctccacggaggcctcaacaagctcgctgagctcttggag
gtcgagagggttggggtctgccaccaggccggttccgatagtttgctgacgtcatctacc
ttccgcaagttgaaggagaatttctttagtggctccctccagaagtatgctggagtcttg
tatggattaggggttgaaaatgcacagaatactactcattga

DBGET integrated database retrieval system