Arachis duranensis: 107460063
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Entry
107460063 CDS
T04300
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107460063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107460063
03036 Chromosome and associated proteins [BR:
adu03036
]
107460063
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107460063
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107460063
mRNA degradation factors
5'-3' decay
Decapping complex
107460063
Chromosome and associated proteins [BR:
adu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107460063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
DUF5382_N
TFIIA
NA-iREase2
VPS13_N
Motif
Other DBs
NCBI-GeneID:
107460063
NCBI-ProteinID:
XP_015933871
UniProt:
A0A6P4B8M2
LinkDB
All DBs
Position
8:complement(139464..145048)
Genome browser
AA seq
515 aa
AA seq
DB search
MNNNNNYYNRARYPPPGIGGGGLGRGGGGGGPGFNQNSPFQPRPNYQQHQQQHQQLQQQH
QQYVQRQMVQQQQQQQQQQQQQQWLRRAQMGAADSNVVDEVEKTVQSEAIDPSSQDWKAR
LKVPPPDTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSD
ILARAKNGTGKIAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQV
MVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSPEF
QPSIQQLIHFLPSHRQILMFSATFPVTVKDFKDRYLQKPYVINLMDELTLKGITQYYAFV
EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRV
FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVN
LITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacaacaactactacaacagagcgaggtacccaccacctgggatcggtggc
ggtggtcttggacgaggaggaggaggaggaggccctggtttcaatcaaaactcaccgttt
cagccaaggcctaattaccagcaacaccagcaacagcatcaacaactacaacagcagcat
cagcaatatgttcagaggcagatggtgcagcaacaacaacagcagcagcagcagcagcaa
caacagcaatggctgagaagggcgcagatgggtgctgctgactccaacgtcgtggatgag
gttgagaagaccgtgcagtctgaagccattgacccgagttctcaagattggaaggcaagg
ctaaaggttccaccacctgatacgcgttataagacagaggatgtgacagcaactaaagga
aatgaatttgaggattattttttgaagcgagagttgctcatgggaatatatgagaagggt
tttgaaaggccttctcctatccaagaagaaagcattccaattgctcttactggtagtgac
attcttgcaagggctaaaaatgggacaggcaaaatagctgcattttgcattcctgcattg
gaaaaaattgaccaggataacaatgttattcaagttgttatattggttccaacaagggag
ttagctttgcaaacatctcaagtatgcaaagaacttggaaagcacttgaaaattcaagtg
atggttacaactggtggtactagcctgaaagatgatatcatgcgcttatatcaaccagtt
catttactagttgggactcctggaaggatattggatcttgctaagaagggtgtttgcgtt
ctgaaagattgcgcaatgcttgttatggatgaggctgataagcttttgtccccagaattc
cagccttctatacagcagctgattcattttcttccttcacaccgacaaattctgatgttt
tcagcaacatttcctgttactgtaaaggatttcaaagataggtatcttcaaaagccatat
gtcattaaccttatggatgagctaactttgaagggtatcacacagtattatgcatttgtc
gaagagagacagaaggttcactgcctgaatacactattttctaagttgcaaataaaccag
tcaatcatcttttgcaattcggtgaatcgtgttgaactccttgcaaaaaaaatcaccgag
cttggatattcgtgtttctatattcacgcaaagatgttgcaagatcatcgtaatagagtg
tttcatgacttccgcaatggcgcctgccgtaatcttgtttgtactgatctttttactagg
ggaatagacattcaagcagtcaatgttgttattaattttgattttcccaagaattcagaa
acttatctccacagggtcggtcgctcagggaggtttgggcatcttggtttagcagttaac
ttgatcacttatgaggatcgctttaatttatataggattgaacaagaacttggaactgaa
ataaagcaaattccaccacacattgaccaggcaatttattgccggtga
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