Arachis duranensis: 107460596
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Entry
107460596 CDS
T04300
Name
(RefSeq) LOW QUALITY PROTEIN: putative transcription elongation factor SPT5 homolog 1
KO
K15172
transcription elongation factor SPT5
Organism
adu
Arachis duranensis
Pathway
adu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107460596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107460596
03019 Messenger RNA biogenesis [BR:
adu03019
]
107460596
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107460596
RNA polymerase I system
107460596
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
107460596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW6_SPT51-2
KOW4_SPT5
Spt5-NGN
KOW2_Spt5
KOW7_SPT5
KOW
KOW5_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
DUF4438
Motif
Other DBs
NCBI-GeneID:
107460596
NCBI-ProteinID:
XP_020984359
UniProt:
A0A6P5MGK1
LinkDB
All DBs
Position
8:complement(8917284..8924797)
Genome browser
AA seq
1011 aa
AA seq
DB search
MSHRGMDDDDEEEYEEDEQVADFDEEAEEEEDDRGRGSGGRKRRRSDFIDDDAEEVDEDE
EEEDDDDDYGGGGGRRRQNRKASASHFFDDIAEVDSDGEEEEEEGEDDFFVDNGNDIPED
NVSRSRLHRPLHEQDNEDFEALERHIQERYARRVESFDEEATDVEQQALLPSVRDPKLWM
VKCQIGHERETAVCLMQKYIDKGAELQIRSAIALDHLKNYIYVEADKEAHVREAIKGLRN
IYGASKITLVPIREMTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTV
KLIPRIDLQALANKLEGREVVKKKAFVPPPRFLNVDEARELHIRVEHRRDAYGERFDAIG
GMMFKDGFLYKTVSIKSINALNVKPTLNELENFRKPGESGDSDVASLSTLFANRKKGHFM
KGDAVIVVKGDLKKLKGWVEKVDEDNVHIRPELKGLPKTLAVNERELCKYFEPGNHVKVV
TGAQEGATGMVVKVEQHVLILLSDTTKEHIRVFADDVVESSEVTTGITKIGDYELRDLVL
LDNMDFGVIVRVESEAFQVLKGTADRPEVALVKLREIKCKVEKKINAQDKHKNTISVKDV
VRVVEGPCHGKSGPVEHIYRGFLFIYDRHHLEHAGFICARACSCLVVGGSRSSGDRNGDA
YSRFPGLRTPPRIPQSPRRFSRGGPPIDSXGRHRGGTGHDGLAGATVKVRQGAYKGYCGR
VIEVKGTTVRVELESQMKVVTVDRNHISDNVAVTPQRETRYSIGCETPMHPSRTPLHPYM
TPMRDPGATPIHDGMRTPRRDRAWNPYTPMSPTRDWEDGNPGSWGTSPQSQAGSSPSRLY
EAPTPGAGWGSTPGGNYNEAGTPHDSYVNVASPYLPSTPGGQPMTPNSAMYLPSTVLGGD
NEGPWFMPDILVNVHRPGEESVGVIREVLPDGSCKVALGSSGNGETITALPNEMEAVVPR
KSDKIKIMGGALRGSTGKLIGVDGTDGIVKVDDTLEVKILDLVILAKLAQP
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacagaggaatggacgacgatgatgaggaggagtacgaggaggacgagcaggta
gccgacttcgatgaggaggcagaggaggaagaggacgatagggggcgcggcagcggcggc
aggaagcgtcggagatctgatttcatcgatgatgatgctgaggaggtggatgaggatgag
gaggaggaggacgatgacgatgattatgggggtggtggcggccgcaggcgccagaatagg
aaagcctctgcttctcatttcttcgatgacatagcggaggtggattcagatggggaagaa
gaagaagaggaaggggaggacgatttctttgttgataatggaaatgatattcctgaggac
aatgtcagtaggagcagacttcataggcctttgcatgagcaagataatgaagattttgaa
gctttagaaagacacatccaggaaagatatgcaaggcgtgtggaatcttttgatgaagag
gctacagatgtagaacagcaagctcttttgccatctgttagagatccaaagctgtggatg
gtgaaatgtcagattggtcatgagagagagacagctgtttgccttatgcaaaagtatata
gataagggggctgaattgcaaatcaggtcagctattgcccttgatcatcttaaaaactat
atttatgtggaagcagataaagaggcccacgtgagagaggctattaagggtttaaggaac
atatatggggcgtcaaaaataacactagttccaataagagaaatgacggatgtgctgtca
gttgaaagcaaagcaattgatcttgccagagatacttgggtcagaatgaagattggcaca
tataaaggggaccttgccaaggtagttgatgttgataatgtgaggcagagggttacggtg
aaactgattccaaggatagacttgcaggcgcttgcaaataaactggaaggtagagaagtt
gtgaaaaagaaggcgtttgtccctcctcctcgttttttaaatgttgatgaagctagggaa
ctgcatattcgtgtcgagcatagacgtgatgcctatggggaaagatttgatgcaattgga
ggaatgatgtttaaggatggattcttgtacaaaactgtatcaataaaatccattaatgct
ctaaacgtcaaacctactttgaatgaacttgaaaattttcgaaaacctggtgagagtggt
gacagcgatgtagcaagtctgtcaactttgttcgctaacagaaagaaaggccattttatg
aaaggtgatgctgtaattgttgtgaagggtgatttgaagaagttgaaggggtgggtggag
aaagtagatgaagataatgttcatataagaccagaattgaagggtcttcctaaaaccctt
gctgtaaatgaaagggaactttgtaaatattttgaacctggaaaccacgttaaggttgtt
actggtgctcaagagggtgctaccggcatggttgtgaaggtggaacagcatgtattgatt
ctattatccgacacaacaaaagaacatatccgtgtgtttgcagatgatgttgtggagagt
tctgaagtgaccactggaattacaaaaattggggactatgaacttcgtgatcttgtattg
ttagataatatggactttggtgtaatagttcgtgtagaaagcgaggcatttcaggttctt
aaggggactgcagacaggcctgaagttgcacttgttaaattaagagagattaaatgcaag
gtagagaagaaaataaatgcgcaggataagcataagaatacaatctcagtaaaggatgtt
gtgcgagttgtcgaaggtccttgccatggaaaatctggtcctgtggagcacatatatagg
gggttcttgttcatctatgatcgccatcatcttgaacatgcaggctttatatgtgctagg
gcttgctcgtgtttggtcgttggaggttcacgttcgagtggtgacagaaacggtgatgcc
tactcgagattccctggccttagaactccacctcgtattccccagtccccgagaaggttt
tcacgaggagggcctccaattgattcttgaggaaggcacaggggtggaacaggacacgat
ggtttggctggtgcaacggtcaaagtacgccagggtgcttataaaggttattgtggacgt
gtaatagaagttaaaggcacaacagttcgggttgaattggagtcccaaatgaaggttgtg
acggttgatcgcaaccatatatcggataatgtagctgtaaccccacagcgtgaaactcga
tattcgattggatgtgaaaccccaatgcatccttctcgaactcccctacatccatatatg
acccctatgagagatcctggagcaactcctatacatgatggaatgaggacaccaaggcgt
gaccgggcatggaatccttataccccaatgagtccaacaagggactgggaagatggaaat
ccaggctcatggggaaccagcccacagtcccaggcaggaagctcaccttcacggctatat
gaagcccccactcctggtgctggttggggtagcactcctggcggaaactataatgaggct
ggaacaccgcatgactcatacgtaaatgttgcaagcccatatttaccatcaacacctggt
gggcagcctatgacgccaaattccgctatgtatcttcctagcacagttttaggtggggac
aatgaggggccatggtttatgccagacatattagttaatgtacacaggccaggtgaagaa
tctgttggagttataagagaggttcttccggatgggtcttgcaaggtagcgcttggctca
agtggaaatggtgaaacgataactgcccttcccaatgaaatggaggccgtggtgccaagg
aaatcagacaaaataaagataatgggtggagcattgagggggtctacaggcaagttgatt
ggtgtagatggtactgatggtattgtaaaggtagatgacacattggaagtcaagatttta
gacctagttattttggctaaattagctcaaccatga
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