Arachis duranensis: 107461029
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Entry
107461029 CDS
T04300
Name
(RefSeq) uncharacterized protein LOC107461029 isoform X1
KO
K06100
symplekin
Organism
adu
Arachis duranensis
Pathway
adu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107461029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107461029
03019 Messenger RNA biogenesis [BR:
adu03019
]
107461029
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107461029
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107461029
U7-dependent histone pre-mRNA processing factors
107461029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
107461029
NCBI-ProteinID:
XP_015934942
UniProt:
A0A6P4C0Y0
LinkDB
All DBs
Position
8:15319218..15337505
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AA seq
1329 aa
AA seq
DB search
MASSSRDQALSLFAAANNHGDVNVKLSSLTQAKDLLLSLDPSLSADLFPFFLELQSSPES
LVRKLLIQLIEEIGFKAVDHSPALVSILLTFLRDADPIIVKQSIVSGTNIFCNVFVEMIV
QFQQYGKVERWLEGVWMWMLKFKDAVFGIALEPGSAGIKLLGLKFLEIFVLLFTPDNNSP
EKSTGEGSRQAANISWLVGGHPLLDPVALKSEANRTIGILLNLLQPGASLPGCLTITVIN
CLSAIARKRPQHYDTIFSALLDFNPNFQTAKRYHIASVQYSLRTAFLGFLRCTYSPILES
RERLIKTLRAMNAADAADQVIRQVDKIIKNGDRSTRDARVIKDDQSSIQSHVSGELSRKR
AIPLDNEHLANGHEAISKRIRSGPDPHLTLPVQVNDFGQDLNSVNGVSLNATALDGELTA
VEQMIALIGALLAEGERGAESLEILVSKIHPDLLADIVITNMKHLPKTPPPLARIGNSPV
PQQVGSQFSQSKVLAPSAPVSSIQSLAVTDQAPVSSTTITATSSSLSDINNLPADSKRDP
RRDPRRLDPRRIAATLGGAAGSVGDDIVATKLELDDPVSLIKPSSPPVASAEENNQSEAT
INLKNEDIISEGPSLSGPDRLTPKTEVLERPGDTQHIAEAIASLDSSVIPSDATDEDRST
VKLLEDTEANETDSLDFDQFSPDVQVASTSEDTCLELPQLPPYVNLTYEQETKVKHLAIR
HIIESYRHLDGTGCQQFCMPLLARLVAQIDDDNEFIVMLQNQIVEDHWQKGHELVLYVLY
HLHCLTVLDSVENSSSSSVLYEKFLLGVAKSLLESFPASDKSFSRLLGEVPLLPESALNI
LSDLCCSDVVDHNGKIIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCAVHPQDEIR
AKAIRLVTNKLYQLSYIAEDVEKFATDTLLSAVDHDVSQSGPSEQRPEVEVACQEISGTS
QVSESTLSEHDSDRTTKPMAQSLPSITFSEAQRLISLFFALCTKKPSLLQIVFDVYGRAP
RMVKQAFHRHIPILLRALGQSYTELLHIISDPPQGSENLLTLVLQILTQDSTPSLELIST
VKRLYETKFKDVSILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPAL
TPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLF
MRTVIQAIDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPP
PQLESALNRHANLRGPLASHANQPAVKSTIPRATLEVLGLASESHVQQHLPTSLHPSDTN
SSVQGATLT
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcctccagagaccaagccctctctctcttcgccgccgccaacaaccacggc
gacgtcaacgtcaagctctcatccctcacccaagccaaggacctccttctctccctcgac
ccttctctctccgctgacctcttccctttcttcctcgagcttcagtcctctcccgagtcc
ctcgttcgcaaattgctcatacagttaattgaggagattggttttaaagcagtcgatcat
tctcctgcacttgtttctatactattaacatttttgcgagatgctgatccgataattgta
aagcaatctattgttagtggcacgaacatcttctgtaatgtttttgtggagatgattgtg
cagtttcaacaatatggtaaagtagagaggtggttagaaggggtttggatgtggatgctt
aagttcaaggatgctgtttttgggattgctcttgagcctggttctgccggaataaagttg
ctgggactgaaattcttggaaatattcgtcttgctttttactcctgacaacaatagtcct
gagaaatcaactggagaaggatctaggcaagctgctaatatatcatggttggttggtggt
caccctcttcttgatccggtggctctcaagtcggaggcaaacaggaccattggcattcta
ttaaatttattgcagcctggtgcaagtctccccggttgtttaacaattactgttataaat
tgtttatcagctattgcaaggaaacggccgcaacactacgatacaattttttctgcattg
ctcgattttaatccaaattttcaaacagcgaaaagatatcatattgccagtgttcagtac
tctttaagaactgcttttttggggtttcttaggtgcacttattcacctatactagagtct
cgagaaagattgataaagaccctgcgggccatgaatgcagcggatgctgccgatcaggtc
atcagacaagttgacaaaattattaaaaacggtgatcgttctacacgtgatgctcgggtt
atcaaggatgatcaatcatcaattcagtcacatgtttcaggggaattatctagaaaaaga
gctattcctttggataatgaacatctggccaatggtcatgaggcaatctctaagcggatt
cgatctggtcctgaccctcacttaactttaccagttcaagtaaatgactttggacaggat
cttaactctgttaatggagtatcacttaatgctactgcactagatggtgaattaactgca
gtagagcaaatgattgctttgattggtgctttgcttgctgaaggagaaagaggtgctgaa
tctcttgaaatccttgtttccaagattcatcctgatctgttggcggatattgtgataaca
aatatgaagcacttgcctaagacacccccaccgctagcaaggattgggaattcgccagta
cctcaacaagttggttcccaattcagtcaatcaaaagttttagcaccatctgctcccgta
agttctatccaatccttggctgttactgaccaagcaccagtctcttcaactacaatcact
gccactagttcatcactgtctgacatcaataatttgcctgctgattctaagcgcgaccca
cgcagggatccccgtcgcttggatccacggcgtatagctgcaactcttggtggggcagct
gggtctgttggagatgatattgtggcaacaaaattagagttagatgatcctgtatctttg
attaagccttcttcacctcctgttgcctccgctgaagaaaataatcaatctgaggcaaca
atcaatctgaaaaatgaggatatcatttctgaaggtccctcactttctggacctgatcgg
ctaactcccaagacagaggttctggagaggcctggagatacccagcacattgcggaagca
attgcttctttggattcctcagtcattccctctgatgcaactgatgaagatcgtagtaca
gtgaagctgttggaggatactgaagcaaatgagaccgactcattagattttgatcagttt
tctcctgatgtccaagttgcatctacatcagaagatacctgtctagaattaccacagcta
ccaccatatgtgaatctaacctatgagcaggaaactaaggtgaagcacctggctattagg
catattatagagtcatacaggcatttggatgggacaggatgtcagcaattttgcatgcca
ctccttgctcggcttgtagctcagattgatgacgataatgagttcattgtgatgttgcaa
aaccaaattgtggaagaccactggcaaaagggtcatgaactagtgctgtatgttttgtac
catctgcactgcctcacagtattggattcagttgaaaactcttcatcttcttctgtcttg
tatgaaaagtttctcttgggagtggccaaatctttgttggaatcttttccggcttcagac
aaatcttttagtaggcttcttggtgaagttccacttttgccagaatctgccttgaatatt
ttgagtgatctctgctgttctgacgttgttgatcataatggaaaaattattcgtgatatc
gaacgtgtaactcaaggtctaggtgctatatggagtttaattttggggcgtccacaaaat
cgccaagcgtgcttgggcatagcattaaagtgtgctgttcacccacaagatgagattcga
gcaaaagctattcggctggtgacaaacaagctctatcagcttagttacattgcagaagat
gttgagaaatttgccactgatactcttctttctgccgtagaccatgatgtttcgcaatct
ggaccctctgaacagagacctgaggtagaggttgcatgtcaggaaataagtggcacatca
caggtctcagagtctaccctttcagaacacgactctgatagaaccactaagccaatggct
caaagtcttccgtctataacattctctgaagctcaacgcttaatttctttatttttcgct
ttatgtacaaagaaacctagtcttcttcagattgtatttgatgtctatgggcgagcccca
aggatggttaagcaggcttttcatcgccacattcctattcttctgagggcattagggcaa
tcttatactgaattgcttcatattatatctgatccaccacaaggaagtgaaaatcttttg
acactggtactgcaaatattgactcaagattcaacaccatcattggaactgatatctact
gtaaaacgtctatatgaaactaaatttaaggatgtttcaattctggttccactgctgtca
tcactctccaaaaaggaggtgttaccaatattcccccgccttgttgacctaccattggag
aagtttcagagggcacttgctcacatactacagggatcggctcatacaggtccagcatta
acgccggttgaagtgttggtcgcaatccatggaattgttcccgagaaagatggccttgca
cttaagaagataacagatgcttgttcagcatgttttgagcagcgtacagtgttcacacaa
caggttctggcaaaagcattgaaccagatggttgaccaaactccgttgcctctacttttc
atgaggacagttattcaggcaattgacgctttccctgcattggttgattttgttatggag
atactttcaaaacttgtgactaaacaggtgtggcgcatgccaaaactttgggttggtttt
ttaaaatgcgtataccagactcaaccgcgttcttttcatgtattattgcagttgccaccg
ccacaactggaaagtgctcttaacaggcatgctaacctcagaggtccccttgcttcccat
gccaatcaaccagcagtaaaatctacaattcctagagcaactttagaagttctgggtctt
gcaagtgaatctcacgtgcagcaacatttgccaacatcactgcacccatctgacactaat
tcttcagttcaaggagcaacactgacatga
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