Arachis duranensis: 107461069
Help
Entry
107461069 CDS
T04300
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
adu
Arachis duranensis
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107461069
Transcription machinery [BR:
adu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
107461069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
107461069
NCBI-ProteinID:
XP_015935010
UniProt:
A0A6P4B760
LinkDB
All DBs
Position
8:15866888..15870573
Genome browser
AA seq
562 aa
AA seq
DB search
MGLLNLRLNYNASSAAIHSPFSFNNHSCITLSSAGGREATFNSARLSSLSTVNEEGEASQ
RSFPTAFSCLSSELETLDNDSLYIEEIKVKKGKRSISSVQEMLNNTQRQRHFEKEISTAC
LKFQSFRAIHYRLLMENLGTLEQTFADSEAIKLKSDIVLQLGKLGALELFNVCLSRSLEL
SSHAVGLGEHQKENRKIDEKIDKVFVQSTRKKQNKRRTRKAFTAMEVRLQPLTSKVDDKE
YRLHSLPASVKKASNRKNTRIMVARREAEMSKGVKVLAELEKIREGIEESTNQVASLKSW
AEAAGVHEKVLQQKLHYCQRCRDELIRSTRSLVVYLARKYRGMGIALEDLLQAGYIGVLQ
GAVRFDYTRGYRFSTYVQYWIRKSISRMVERYAREIVVPWSLSRAMNQIQKAQKSLKMTS
MKSPDDHEIAKATGLSLEKIRSAGNCLRVVASTNQKMGDSLSVKYTEFMPDMSIENPEEA
VMKQHMRKDLYDLLKVLDSREREILTLRFGLRDHHSKSLEEIGRYFKVSKECVRKIERKA
LTKLRNKAATSNFNFYLLDLDS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcttaacctgaggctcaattataatgcttcttctgctgctattcactctcct
ttctctttcaacaatcactcatgtatcacactttcttctgctggaggcagggaagcaact
ttcaactcagcgaggctatcttcgctttcgaccgtaaatgaagaaggagaagcatcccag
agaagctttccaacagcattcagttgtttgtcatcagaattggaaaccttggacaatgat
tctttatacatagaagaaatcaaggtgaagaagggtaagaggtctattagtagtgtgcaa
gaaatgcttaataatacacaaagacaaaggcattttgaaaaggagatatcaacagcctgc
ctcaaatttcagtcttttagagcgatacattatcgtttgttaatggaaaatctaggcact
ttggaacaaactttcgctgattctgaagcaattaaattgaaaagtgacattgtattgcaa
cttggaaagcttggagctctggaattgttcaatgtctgtctgtcgagatctcttgaactg
tcgtcacatgccgttggacttggagagcaccagaaggaaaacaggaaaatagatgagaag
atagataaagtttttgttcagtctaccaggaaaaaacagaataaaagaagaacacggaaa
gcatttactgctatggaagttcggctgcagccgttgacttcaaaagttgatgataaggaa
tatagattgcattcccttcctgcttctgtaaagaaagcttcaaatcgtaaaaatacaaga
ataatggttgctagaagggaggcagaaatgtcaaaaggagtaaaggttctagcagagttg
gagaaaattcgagaaggaatagaagagagtacaaatcaagtagcaagcttgaaaagctgg
gcagaagcagctggagttcatgagaaggtgctacagcagaagttgcattactgccaacgt
tgtcgtgacgagcttatacgaagtactcgttccttggtcgtttaccttgcaaggaagtac
aggggtatgggaatagcactggaagatctacttcaggcaggatatataggtgttctccag
ggagctgtgagatttgactatacaaggggttatagattctcaacttatgtgcagtattgg
ataaggaaatcaatttccagaatggtggaacgatatgctcgagaaatcgtagttccttgg
tcattgagcagggccatgaatcagatacagaaagcacaaaaatccctgaaaatgacctcc
atgaaaagcccagatgatcatgaaatcgcaaaggcgacaggtctttctttggaaaaaatt
agatcagctggaaattgtctaagagttgttgcttcgaccaatcagaagatgggagactct
cttagtgtaaagtatacggaatttatgcctgatatgtcaatagagaatcctgaagaagct
gtgatgaagcaacacatgagaaaggacttatatgatctcttgaaagtcttggattcaaga
gaaagagaaatattaaccctccgttttggtcttagagatcaccattcaaagtcacttgaa
gaaatagggagatatttcaaagttagcaaagaatgtgtgaggaagatagaaaggaaagca
ctaacaaaattaaggaacaaagcagctacatcaaatttcaatttttatttattggattta
gattcttag
DBGET
integrated database retrieval system
