Arachis duranensis: 107461453
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Entry
107461453 CDS
T04300
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
adu
Arachis duranensis
Pathway
adu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107461453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adu03041
]
107461453
03009 Ribosome biogenesis [BR:
adu03009
]
107461453
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107461453
Spliceosome [BR:
adu03041
]
Complex A
U1 snRNP components
U1 related factors
107461453
Complex B
107461453
Ribosome biogenesis [BR:
adu03009
]
Eukaryotic type
Pre-60S particles
Helicases
107461453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
107461453
NCBI-ProteinID:
XP_015935430
UniProt:
A0A6P4BC81
LinkDB
All DBs
Position
8:complement(23254509..23258227)
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AA seq
501 aa
AA seq
DB search
MSRYDSRAADPASYRDRRSDSGLGAPPASASASASSRRDYDDGGAYPRKLNLDGLPHFEK
NFYHESPSVRAMTESEVDDYRLRREITVEGRDVPKPVKSFHDVGFPEYVLQEIKKAGFVE
PTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPT
RELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNH
TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYN
PYKVIIGSSDLKANHAIRQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQIT
RQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDF
PGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQRVSPELAAMGRGA
PPPPSGFRDRGKGYGSSRPWS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttatgacagccgcgccgccgacccagcttcctatcgtgaccggagaagcgat
tcggggctaggagcacctccggcttcagcttcagcttcagcttctagtagaagggattac
gatgacggtggagcctacccaaggaagctgaatttggacggcttgccccatttcgagaag
aatttctaccatgaatcgccttccgttagggcaatgactgagtccgaggttgacgactac
cgtctccgcagggaaatcaccgttgaaggccgtgacgtccccaaacctgtcaagtccttt
cacgatgttggctttccagaatatgtactgcaagagattaagaaagctggctttgtcgaa
cctacgcccattcaatctcagggttggccaatggctttgaaagggcgcgatctgatcgga
attgcggaaacagggtcagggaagacgcttgcttacttgttgcctgccatagttcatgta
aatgctcagccaattctagatcctggagatggaccaattgtgttagttttggccccaact
cgtgaacttgccgtccaaatacaacaggaggctactaaatttggtgcatcatcaaggatt
aagagtacatgcatctatggtggggttccgaaggggcctcaggtgcgtgatctccaaaaa
ggcgttgagattgtaattgctactcccggaaggttaattgatatgcttgagtcaaatcat
actaacttgcggagggtcacatacctagtattggacgaagctgataggatgttggacatg
gggtttgatcctcagataaggaagattgtctcacagattcgtccagatcgtcagactctg
tactggagtgctacctggccaaaggaggttgaacaattggcaaggcagttcctttataac
ccgtacaaagtaattataggttcttcagatttaaaagctaaccatgccatacgacaatat
gttgacattgttcctgaaaagcagaaatatgacaaattggtgaagctgctggaggacatc
atggatggcagccgaatactgatattcatggataccaagaagggatgtgatcagatcact
aggcagctccgcatggatggttggcccgcactatcaattcatggagataaaagtcaagca
gaaagagattgggtgctctcagagtttaaatctggaaagagtccaataatgactgcaaca
gatgttgcagctcggggtttagatgtgaaggatgtgaagtatgtgataaattatgacttc
ccgggatcacttgaagattatgtacatcgtattggtcggacagggagagctggtgcaaaa
ggaactgcatacacgtttttcacagctgctaatgccagatttgcaaaggaacttataacc
atacttgaggaagctggacaaagagtgagccctgaattggctgcaatggggcgtggtgca
cctcctccgccatcaggtttccgagaccgagggaagggttatggcagcagtcgcccgtgg
agctaa
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