Arachis duranensis: 107463512
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Entry
107463512 CDS
T04300
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
adu
Arachis duranensis
Pathway
adu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107463512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adu03041
]
107463512
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107463512
Spliceosome [BR:
adu03041
]
Complex C
Other components
Step II factors
107463512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
PhoH
AAA_30
DUF2532
ABC_tran
TsaE
Motif
Other DBs
NCBI-GeneID:
107463512
NCBI-ProteinID:
XP_015937796
UniProt:
A0A6P4B7W9
LinkDB
All DBs
Position
8:complement(49496524..49504335)
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AA seq
720 aa
AA seq
DB search
MPSMAKGSHGPCSTGKFSNGKQNRQTEFSARRQKIAQQRKSLPIASVEKRLIEEVQKNDI
LIIVGETGSGKTTQIPQFLFGAGFCRDGKVIGITQPRRVAAITVAKRVAEECGVELGQKV
GYSVRFDDTTSSSTRIKYMTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDILLALLK
NVQSARSRSVADDQGINFGKKNVNVGMSLEKEYGGQSSSFLKKDNHDKYAPLKLIIMSAS
LDARTFSEYFGSAKSVHIQGRQFPVDIFYTLHPEEDYLDASLITIFQIHSKEGPGDILVF
LTGQEEIESVEKLINDRLTQFPEGSQKLQVVPIFAALPSEQQLRVFAPAPSGFRKVILAT
NIAETSVTIPGVKYVIDPGFVKARSYDPGKDMESLIIVPTSKSQALQRSGRAGREGPGKC
FRLYPESEFEKLEDSTKPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRTAIIKSLEQ
LFSLGALTDDCQLSDPVGHQMARLPLDPVYSKALILASQYNCLEEMLITVAMLSVESIFY
APREKQVEARTAIKCFSSPEGDHITLINVYRASNDFLEKRSIEMGKAKFEKAFRKWCKDN
FISSRSLRHARDIHRQIRVHAEQMGLNLASCGDDMLQYRRCLAASFFLNAAVKQPEGTYR
ALASGLVVQIHPSSVLFRQKPECIIFNELVQTNSKYVRNVSRIDYLWLTELAPQYYAVKN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgccttccatggctaagggaagccatggcccttgttctaccggaaaattctctaatgga
aaacagaatcgtcaaactgagttctctgcacggaggcaaaagatagcacagcagaggaag
tctctcccgatagcttctgttgagaaaagactcattgaagaggtccaaaagaatgatatt
ttgattatcgttggagaaacaggaagtgggaaaaccacacagattccacagttcctgttt
ggtgctggattttgccgtgatggaaaagtgattgggataactcaaccgagacgtgtagct
gccattacagttgcaaaacgggttgctgaagaatgtggtgttgagttgggccagaaagtt
gggtactctgttagatttgatgatactacttccagctcaacaagaattaaatatatgaca
gatggattgcttctaagggaagcattgttggatccatatctttccaagtattctgttata
attgttgatgaagcacatgagagaactgtccacactgatatcttgctggccttgctaaaa
aatgtacaatctgctcggtcaagatctgttgctgatgatcagggcattaactttggaaaa
aagaatgtgaatgttggcatgtcactggagaaagaatacggtggtcagagcagcagtttt
cttaaaaaggataaccacgacaagtatgctccattgaagctaataattatgtctgctagt
cttgatgctcgcactttctccgaatattttggcagtgccaaatctgttcatatccaaggg
agacaatttcctgtggatatattttacacattgcatccagaagaagactatttagatgct
tccttgataacaatattccagattcattcaaaggagggccctggtgatatactagtattt
cttactggtcaagaagagattgaatcagttgaaaagcttatcaatgacagactcactcag
tttcctgaagggagtcagaagcttcaagttgtgcctatatttgcagctcttccatctgag
cagcagttgcgggtctttgcaccagctccgtctgggtttcgcaaggtgatattggcaact
aatattgctgagacatcagtaacaattcctggagtaaagtatgtaatagatcctggcttt
gtcaaagcacgttcttatgatcctggaaaagacatggaatctttgattatagtacctaca
tccaaatcccaggcactgcaaagaagtggccgtgcagggcgtgaaggacctggaaaatgc
tttcgtctatatccagaaagtgaatttgagaagcttgaggattcgacaaagccagagatt
aagcggtgcaacctatctaatgtgattttgcagcttaaggccttgggtgttgatgacata
ttagggtttgattttattgagaaaccttcacggacagcgattatcaaatcattggaacag
ctattttcactaggtgctctaacagatgactgtcagctctctgatcctgttgggcatcaa
atggctcggctgccgttggaccctgtttattccaaagctcttatcttagctagtcagtat
aactgcttagaggagatgttgataaccgtagcaatgctgtctgtggaatccatattttat
gctcctcgggaaaagcaagtagaggcaagaactgcaataaaatgcttctctagtccggag
ggagaccacattactttgattaatgtgtatcgagcatcaaatgatttcttagagaagaga
tcaatagaaatgggcaaagcaaaatttgaaaaggctttcagaaagtggtgtaaggataat
tttattagtagtcgttctcttagacatgctcgtgacatccacaggcaaattagggtacat
gctgaacaaatggggctgaatctagcttcttgtggagatgatatgcttcagtaccgcaga
tgtcttgctgcttcctttttcctcaatgcggccgtaaagcagcctgagggcacatacagg
gccttggcaagtgggctggtggtgcagatccacccatcttctgtattattcaggcaaaaa
ccagagtgtattatttttaatgaacttgttcaaactaatagcaagtacgttcggaatgta
agcagaattgactacctatggttaactgagctggctcctcaatattatgctgtgaaaaat
taa
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