Arachis duranensis: 107463985
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Entry
107463985 CDS
T04300
Name
(RefSeq) uncharacterized protein LOC107463985
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
adu
Arachis duranensis
Pathway
adu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107463985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107463985
03041 Spliceosome [BR:
adu03041
]
107463985
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107463985
Spliceosome [BR:
adu03041
]
Complex B
Other components
Prp19-related factors
107463985
Complex C
107463985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
Mad3_BUB1_I
TPR_19
ARM_TT21
ARM_TT21_C
NRDE-2
UTP6_C
Motif
Other DBs
NCBI-GeneID:
107463985
NCBI-ProteinID:
XP_015938369
UniProt:
A0A6P4BZN0
LinkDB
All DBs
Position
9:complement(3456101..3463284)
Genome browser
AA seq
916 aa
AA seq
DB search
MPSSSSISQDLYPSQDDLLYEEEILRNPFSLKLWWRYLIARSESPFKKRFVIYERALKAL
PGSYKLWHAYLRERLDLVRNLPITHSQYDTLNNTFERALVTMHKMPRIWIMYLQTLTHQK
LLTRTRRTFDRALCALPVTQHDRIWEPYLVFVSQRGVPIETSLRVYRRYLKYDPSHIEDF
IEFLVNSCLWQEAAERLASVLNDGMFFSIKGKTRHRLWLELCELLTRHANEVSGLNVDAI
IRGGIRKFTDEVGRLWTSLAEYYIRRGLHEKARDVFEEGMSTVVTVRDFGVIFDSYSQFE
ESMLAYKMEEMGMSDEEEEDGEENGFGDGEEEDVRFKGEDFERKILRGFWLNDKNDIDLR
LARFDYLMERRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTRQILTYTEAVRTIDPMKA
VGKPHTLWVAFAKLYEHHKDLANARVIFDKAVQVNYKTVDNLASVWCEWAEMELRHKNFK
GALDLMRRATAEPSVEVKRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGTLESTRAVY
ERILDLRIATPQIIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKR
YGKTKLERARELFENAVETAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDEATKAVPNDE
KLSMYEIYIARASEIFGVPKTRQIYELAIQSGLPDKDVKTMCLKFAELEKSLGEIDRARA
IYGHASQFANPRSDPEFWEKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLM
QKDQTVNLDEAKDKLKQAGVPEDEMAALERQLAPATNDTATKERKVGFVSAGVESQTDGG
LRVSANHEDIELPEESDSDDEEKVEIAQKDVPSAVFGSLVRGREESGMNGEADGTKDQDN
ESRLGALERIKRQKTK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgccttcatcatcgtcaatttctcaggacctgtacccttcccaagacgaccttctgtac
gaggaagagattctccgaaaccctttcagcctcaagctatggtggcgatacctaattgct
cgttccgaatctcccttcaagaaacgtttcgtcatttacgaacgcgctctcaaagccctt
ccaggttcctacaagctctggcacgcttacctccgcgagcgcctcgatctcgttcgaaac
ctcccaatcactcactctcaatacgacaccctcaacaacactttcgagcgtgctctcgtc
actatgcacaagatgcctcgaatctggatcatgtacctccaaaccctaacccaccagaag
cttcttacaagaaccaggagaaccttcgatcgagctctttgcgctttgccggtcactcag
catgataggatctgggaaccctatttggttttcgtgagtcagaggggtgtgcccatagag
acttctcttcgggtttatcgtaggtacttgaagtacgatccttctcatattgaggatttt
attgagtttttggtgaattcttgcttgtggcaggaggctgctgaaaggttggcttcggtt
ttgaatgatggcatgtttttctcgattaaggggaagactaggcatagattgtggttggag
ttgtgtgaattgctcactaggcatgctaatgaggtctcggggttaaatgtggatgccata
attaggggtgggattaggaagttcactgatgaggttggcaggttgtggacttcgttggcc
gagtattatattaggaggggtttgcatgagaaggcgagggatgtgttcgaggaagggatg
tcaactgttgtgactgttagggatttcggtgtgattttcgattcgtattcacagtttgag
gagagcatgcttgcttacaagatggaggagatgggaatgagtgacgaggaggaagaagat
ggtgaagaaaacggttttggggatggggaagaggaggatgttcggtttaaaggggaggat
tttgagaggaagatcttacgcgggttttggttgaatgacaagaatgacatagacttgagg
ttggcacgttttgattaccttatggaaaggaggccggagttggctaacagtgtgctattg
cgccagaatcctcacaatgtggagcagtggcatcggagggtgaagctttttgagggtaat
cctacgaggcagatactgacttatacggaggctgtcaggacgattgatcccatgaaggca
gtgggaaagcctcatactttgtgggttgccttcgccaagctgtatgaacatcataaagat
cttgccaatgcccgggtcatatttgacaaggcagtacaagtgaattataaaactgtggat
aatctggctagtgtctggtgtgagtgggcagaaatggagttgagacataagaattttaaa
ggagcacttgatcttatgaggcgggctacagcagaaccatcggttgaagtcaaacgaaga
gtggctgctgatgggaatgaaccagttcagatgaagttgcataaatctttgagattgtgg
accttttatgtcgatttggaggagagtctaggtactttggagtctacccgggctgtttat
gagcggatattagatttacgaatagccacaccacaaataattattaattatgcctacttt
ctggaggagcataaatactttgaagatgcttttaaagtgtatgaaagaggggtgaagata
ttcaagtatccacatgtgaaagacatatgggtcacatatctgtctaaatttgtgaagaga
tatggaaagacaaaattggagagagcaagagagctgtttgagaatgcagttgaaacggct
ccagctgatcaagtgaagcctctttacctgcaatatgctaagctggaggaggactatgga
ctagccaagcgagccatgaaagtgtacgatgaagcaactaaggctgttcctaatgatgag
aagttaagcatgtatgaaatatacattgctcgtgcatctgagatatttggtgtacccaaa
actaggcagatctatgagctggcaattcaatctggtcttccggacaaagatgtcaaaact
atgtgcctaaagtttgctgagctggagaaaagcttgggagaaatagatcgagcacgtgca
atatatggacatgcctctcagtttgccaatccacgatcagatccggaattctgggaaaag
tggcatgaatttgaagttcagcatggaaacgaagatacctttagagagatgcttcgcatt
aaacgaagtgtctctgcaagctacagccagacacatttcatattgccagagtatctgatg
caaaaggatcagactgtgaatcttgatgaagccaaagacaagttgaaacaggctggggtc
cctgaggatgaaatggctgctttagaaaggcaactagccccagcaacaaacgatacagca
accaaagagagaaaagtagggtttgtgagtgctggagtggaatcacagactgatggaggg
ttgagagtcagtgcgaatcacgaggatattgagttaccagaagaaagtgactctgatgat
gaggaaaaggttgaaattgcacaaaaggatgtcccttctgctgtttttggcagtttggtt
cgaggtagagaggagagtggaatgaatggagaagcggatggtactaaagatcaagataat
gagagtcggcttggtgcccttgagagaataaagaggcaaaaaacaaaatga
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