Arachis duranensis: 107466525
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Entry
107466525 CDS
T04300
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
adu
Arachis duranensis
Pathway
adu03020
RNA polymerase
adu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107466525
09124 Replication and repair
03420 Nucleotide excision repair
107466525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107466525
03400 DNA repair and recombination proteins [BR:
adu03400
]
107466525
Enzymes [BR:
adu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107466525
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107466525
DNA repair and recombination proteins [BR:
adu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107466525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RVT_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_2
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Pol_BBD
Retrotran_gag_2
rve
DUF4219
gag_pre-integrs
zf-CCHC
Endotoxin_C2
DUF1759
TraF
MIF4G_like_2
rve_3
RNA_pol_Rpb1_R
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
107466525
NCBI-ProteinID:
XP_052110320
UniProt:
A0A9C6TAJ7
LinkDB
All DBs
Position
9:complement(104487708..104499489)
Genome browser
AA seq
3066 aa
AA seq
DB search
MDIRFPYSPAETANVRTVQFGILSPDEIRRNSVVEIEHGKSSEKGKPKVGGLSDPRLGTV
DRKIRCATCTADMAECPGHFGHLELAKPMFHVGFLKTVLTVMRCVCFNCSKILAREQDKK
FEQALKIGNAKNRLKRILDACKNISNCQGGEDSEELVRIGCGALQPKITIDGIKMIAEYK
ARRNKNNDHEQLPNPEERKEILSAERVLGVLKRISDEDCELLGLNPQFARPDWMILQVLP
IPPPPVRPSVMMHSSCRCEESDDLTHQLATIIKHNENLKRHAKNRSPQHIVSQFSLLLQF
HITAYFDNELKGLPRATQRTGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPN
INIDELGVPWSIVLNLSHPETVTPYNIERLKELVEYGPNPPPGKTGAKYIIRDDGQRLDL
RYLKKSCHPHLEIGYFNRVKVISGLRGIAPPILDGSNYHVWQVRMKAFLEGADLWEAVED
DYVVPPLVANPTANQQKLHKERVTRKAKARSSLYAAVTPIIFNRIMSLESAKDIWDFLKK
EYEGNKKIKGMKAMNLKRELERVQMKENESVQEFANKLLDLTNKLALLGTDLGEERLVEK
LLCSVPERFEATIASLENTREISEMPFAEAVSALQAQEQRRVLRRGDEPVEGAMQARVKH
GSGEKKKQGKQFGAQQTSFSSSDAQVRKGSDEACKHCGKKGHPFFRCWRRPNVVCRKCGK
MGHIERICKEKSSQQGEAQAAAGEVEQLFAASGFVSQVSRDGWLVDSGCSNHMSGNEAIF
TNIDRSVNTRVRIGNGDHLEVEGRGNVLLEGPGGVKLMSDVYYVPKIDQNLLSVGQLVEK
GMKIVFDKNECAIADEEGKLLFRIPMQNKTFAFDPASKESKAMACVQGQEELWHRRLGHF
HYKGLQFMQRHGLVEDLPQLGSEVSDCEVCLQGKLVRKPFQKTRWRAKKKLQLVHSDVCG
PMPEESLNKSKYFVTFIDDCTRFCWVYFLKQKSEVDEVFLRFKQEVENEANCKIKTVRSD
NGGEYTSKRFKAICEDSGIKQQFTVPYTPQQNGVSERKNRSIVEMGRCMLQGKQLPKSFW
AEAVNTAVFLLNRLPTKALNKQTSFEAWHGYKPKVSGLRTFGCLCYYLTPSVSRDKLDHR
GEAGIFVGYSSQSKAYRVYCPDAQKITVSRDVIFCEDKNWERAVFEKKMADNIVVEANVQ
NEDELNEEADLQNECELIEDELIDHLPMRGTRPLAEVYARCNVALLEPGTVEEAKGSVEW
ASAMKEELSMINKNNTWQLVSKPDHKKTIGVKWVFKTKLNPNGTVNKYKARLVVKGYAQV
SGVDYSETFAPVARMDTIRLLLAVAAQKRWTIYQLDVKSAFLNGDLSEDIYVDQPEGFVV
KGHEDKVYKLRKALYGLKQAPRAWYSKIDCYLHQLGFQKSLSEVTLYYKRSERGLVVVSI
YVDDLLVTGEEESEIVKLKVGLMKQFEMTDLGRMSYFLGMEIQQKEGEIFICQKKYIREV
LKRFEMGECKTVTTPVNQKEKLSKSNVQDSEHENEYRSLVGCLMYLTTTRPDIQYEVSIL
SRFLHCAAKEHLTAAKRVLRYLKGTQSYGVKFKAVPEMKLVGFVDSDWGGSVEDMKSTTG
FCFSLGSGCFSWSSKKQEVVAQSTAEAEFVAATAAAKHAVWLRKLLCDLGLQEKRSTVLY
VDNQAAIAIAQNPVFHGKTKHFKLRFYYLREVQQEEEVELKYCKTDNQIADVFTKPLALI
GSKSLVASEVERHLMDGDLVLLNRQPSLHKMSIMGHRIKIMPYSTFRLNLSATKPYNADF
DGDEMNMHVPQSFETRAELLELMMVPKCIVSPQSNRPVMDIVQDTLLGCRKITKRDTFIT
KDVFMNILMWWEDFDGNVPTPAILKPEPLWTGKQVFNLIIPKQINLTRYSSWHDDNEGGS
SITPGDTMVRIEKGELLTGTLCKKTLGASTGSLIHVIWEDAGPDAARKFLGHTQWLVNYW
LLQNSFSIGIGDSIADASTMEVINQTISEAKEKVKTLFRDAQEKKLESEPGQTMMDTFEK
KVNEVLNEARNDAGKKAQTSLSESNNLKAMVTAGSKGSFINISQMTACLGQQNVEGKRIP
FGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGVIDTAVKTSETGY
IQRRLVKAMEDIMVKYDGTVRNSVGDVIQFLYGEDGMDAVWIETQNLDSLKMKKSDFDRT
FKYEFDKENWNPSYMLEGPIEDLKSSIELRNLLEDEFEMLEHDRHLLANEIATTGTSSLP
LPVNLKRLIRNAQKTFKIDFRRPSDMDPIEIVEAVDKLQERLKVVPGDDLLSQEAQKNAT
LLFNILLRSTFASKRVLEEHRLSREAFEWLVGEIESRFLQSLVASGEMIGCVAAQSIGEP
ATQMTLNTFHYAMTLNTFHYAGVSAKNVTLGVPRLTEIINVAKRIKTPSLSVYLKPEVSR
TSEEAKRVQCDLELTTLRRVTQATEVWYDPDPLYTVIEEDVDFVKLYNEMPDEEVALERM
SPWLLRIELNREMMVDKKLSMADIAEEIKHVFDDDLKCIFNDDNAEKLILRIRIMNDEAH
RGEIQDDSADDVFLKRIESSMLTEMTLRGIPGISKVFMKSIDVPKFDDNEGFQTHKEWML
ETDGVNLLAAMCHEQVDATRSISNHLIEIIEVLGIEAVRRALLNELRAVISFDGSYVNYR
HLAILCDTMTYRGHLMSITRHGINQNDTGPMMRCSFEQTVDILLDAAAYAEADHLRGVSE
NIMLGQLAPLGTGQCSLYLNDEMIKNAFDLQLPSYMDGLDFGKTPAHFSMSTPYLDGLMS
PTHLSSPNLRPSPINNAVFSPYGMACGYSAYRSDYSISSPAYDPVSPKYTPTSPVYSPVS
PSYSPLSPTYTPTSPAYSPISPAYSPSSPGYSPTSPSYSPISPTYSPSSPWYSPTSPSYS
PISPIYSPSSPEYSPTSPSYSPISPAYIPSSPGYSPTSPSYSPTSPYYSRLSAEYSPTSP
YYSPSSPTYSPSSPKFSPSSPDFSLTSPQFSASMEYSPSRHGYSPSSTSQYTPXTSAKDE
DDNTTL
NT seq
9201 nt
NT seq
+upstream
nt +downstream
nt
atggatattaggtttccttattcgccggcggaaactgcaaatgtacgtacggttcagttc
ggaattctcagccccgacgaaatcaggagaaactctgtggtggaaatcgagcacgggaag
agctcggagaaggggaagccaaaggtcggagggttgagcgaccctcgccttggaaccgtt
gataggaagattcggtgtgccacgtgtacggctgatatggctgagtgcccggggcatttc
ggtcacttggagctcgctaagccaatgtttcacgttggtttcttgaagacggtgctcacc
gtcatgcgttgtgtttgcttcaactgttccaagattttggcgcgcgagcaggataagaag
tttgaacaagctttgaagattgggaacgctaaaaacaggctgaagaggatcttggatgct
tgcaaaaacataagcaattgtcaaggtggtgaagattctgaggagctggttcgaattggc
tgcggtgccttgcagcccaagattactattgacggtataaagatgattgctgagtataag
gctcggaggaacaaaaacaatgaccatgaacagcttcctaatcctgaagaaaggaaagag
attctttctgcagaaagggttcttggtgttctaaaaaggataagcgacgaggactgcgaa
ttgttgggcttgaatccgcagtttgcgcgtcctgattggatgatcttgcaagttcttcca
attcctcctccaccagtgagaccttctgttatgatgcactcatcttgtaggtgtgaggaa
agtgatgacttgactcatcagttagccacaatcatcaagcacaatgaaaatttgaagaga
catgcgaaaaatagatcacctcagcatattgtttcccagttttctctgttgttgcagttc
catataaccgcatattttgataacgagttgaagggactgccaagagctactcaaagaaca
ggaaggcctatcaaatcaatttgtagcaggcttaaagccaaagaaggtcggattagagga
aatttgatggggaaaagagttgatttttctgctcgaacggttattacaccagacccgaac
attaacattgatgaacttggagtgccatggagtattgttttgaacctttcacaccctgag
actgtaactccatataatattgaaaggttgaaggagcttgtagagtatggacccaatccc
ccacctgggaaaactggtgccaagtacatcattcgtgatgatgggcaaaggcttgatctc
agatatttgaagaaaagttgccatcctcatttggagataggatactttaatagggtcaaa
gtcattagtggcctcagaggcattgctcctccaattcttgatgggagcaattatcatgtc
tggcaagtgaggatgaaagcattccttgaaggagctgatctgtgggaggcagtggaggat
gactacgtggtgcctccattggttgccaatccaactgcaaatcaacaaaagctccacaaa
gaacgtgtgactagaaaagccaaagcaagatctagtctctatgctgctgttactcctatt
atttttaataggattatgagtctagaatctgcaaaagatatttgggattttttgaagaaa
gaatatgagggcaataagaagattaaaggaatgaaagcaatgaaccttaaaagggagcta
gaaagagtgcagatgaaggaaaatgaatcagttcaagaatttgctaataaactcctagac
ttaaccaataaattggcactgttgggtactgatcttggagaggaaagacttgtcgagaaa
ctcctgtgttctgtacctgaaagatttgaagctactatagcatctcttgagaacacaaga
gaaatctcagagatgccatttgctgaagcagttagtgctcttcaagcacaagaacaaagg
agggtactgaggagaggagatgagccagttgaaggtgcaatgcaggctagggtgaagcat
ggaagtggtgagaagaagaagcaaggcaagcagtttggtgctcaacagaccagtttcagt
tcaagtgatgcacaagtgaggaaagggagtgatgaagcctgcaaacactgtggaaagaaa
ggtcatcctttctttaggtgttggagaagaccaaatgtagtctgcaggaagtgtgggaag
atggggcacatagagagaatctgcaaagaaaagagctctcaacaaggagaggctcaagca
gctgcaggtgaagtggagcaattgtttgctgcttcaggctttgtgtctcaagtctcacgt
gatggatggctggtggacagtggctgttccaatcacatgtcaggaaatgaggcaattttc
actaatattgacagatcagtcaatactagagtgagaattgggaatggtgatcatctagag
gttgaaggaagaggcaatgtgttacttgaaggccctggaggagtgaagctgatgtctgat
gtctactatgttcccaagatagatcagaatcttctgagtgtgggacagttagttgagaag
ggcatgaagattgtgtttgataagaatgaatgtgctattgcagatgaggagggcaaactc
ttgtttaggatccctatgcagaacaaaacatttgcattcgatcctgcaagcaaagagagc
aaagctatggcatgtgtgcagggtcaggaggagttgtggcatagaaggttgggtcacttt
cactataagggattgcagtttatgcagaggcatggtttagttgaagacttgcctcagttg
ggaagtgaagtgtctgattgtgaagtatgtctgcaagggaagctagtaaggaagccattc
cagaaaacaagatggagggccaagaagaagcttcaactggttcactcagatgtttgtggg
cctatgcctgaggagtcactgaacaaaagcaagtactttgtgaccttcattgatgactgc
acaagattttgctgggtctactttctcaaacaaaaatcagaagttgatgaagtatttctg
aggttcaaacaagaggtggagaatgaagcaaattgtaaaataaagacagtgaggagtgat
aatggtggtgagtatacctcaaaaaggttcaaagccatctgtgaggactctggcataaag
cagcagtttacagttccttacactccccaacaaaatggggtgagtgaaaggaaaaataga
agcattgtggagatgggaagatgtatgctacaaggcaaacaactacccaagagcttctgg
gcagaagcagtaaatactgctgtcttcttgttgaataggttaccaaccaaagctctcaac
aagcagacatcattcgaggcatggcacgggtacaaaccaaaggttagtggactaagaaca
tttggttgtctatgctattacttgactccttcagtcagtagagacaagcttgatcataga
ggtgaggctggtatctttgtagggtatagttctcagtctaaagcctatagagtgtattgt
cctgatgcacaaaagattactgtgagtagagatgtgattttttgtgaagataaaaattgg
gagagggcagtatttgaaaagaaaatggctgacaatattgtagttgaagctaatgtgcag
aatgaggatgagttaaatgaggaagcagatctacagaatgagtgtgagctgattgaagat
gaattgattgatcatttgcctatgcgaggtacaagaccactggcagaggtctatgccaga
tgtaatgtggctctcctagaaccaggaacagttgaggaagcaaaaggaagtgtggagtgg
gcctcagctatgaaagaagaactgagcatgatcaacaagaacaacacatggcaacttgta
tctaagcctgatcacaagaagactataggtgtcaaatgggtttttaagacaaaattgaac
ccaaatggcactgtgaacaagtataaagccaggttggttgtgaagggatatgctcaagtg
agtggggtggactactctgaaacttttgctccggttgctcgcatggataccatcagattg
ctactagctgttgctgcacagaaaaggtggaccatctatcagctggatgtgaaatcagct
ttcctaaatggtgacctatctgaggacatctatgtagaccaaccagaaggatttgttgtt
aaaggccatgaagacaaagtgtataagctgaggaaagccttgtatgggttgaaacaagct
cccagggcttggtatagcaaaattgattgttatctgcatcagcttgggttccagaagagt
ctaagtgaagtcactctgtactacaaacggagtgagagaggccttgtggtggtgtctatc
tatgtcgatgatctgcttgttacaggagaggaggagagtgagatagtgaagctgaaggta
ggactgatgaagcagtttgagatgacagatttggggagaatgtcttactttcttggcatg
gagattcagcaaaaagaaggtgagatattcatctgtcagaaaaagtacatcagagaggtc
ctaaagaggtttgaaatgggagaatgcaagacagtcactactcctgttaatcagaaagag
aagttaagcaagagtaatgtgcaggattctgagcatgagaatgagtacagaagtctagta
ggctgtctaatgtatttaacaactactaggcctgacattcagtatgaagtgagtattcta
tcgaggttccttcattgtgcagctaaggaacatcttactgcagcaaaaagggtgttgaga
tatctaaaggggactcaaagttatggtgtgaaattcaaagcagttcctgagatgaagctg
gttggttttgtagatagtgactggggtggttcggtggaagacatgaaaagcacaacgggt
ttctgtttttcacttggatcaggttgtttttcctggagctcaaagaaacaggaagttgta
gcacagtctacagctgaagctgaatttgtggctgcaactgcagctgcaaagcatgcagta
tggctcaggaagttactctgtgatttggggctgcaagagaaaagatcaactgtgttgtat
gtggacaatcaagctgcaattgcaattgctcagaatccagtctttcatggcaagactaaa
cacttcaagctgagattctattatctgcgtgaagtacaacaggaggaagaggtggagctg
aagtattgcaagacagataatcagatagctgatgtcttcaccaagcctcttgctttaata
gggtcaaagtcattagtggcctcagaggtggagcgccatttgatggacggagacttagtt
ctcttgaatcgtcagcctagtcttcataaaatgtccattatggggcacagaatcaaaatc
atgccttattctacgtttcggcttaatttgtcggcaactaagccttataatgctgatttt
gatggggatgaaatgaacatgcatgttcctcagtcatttgaaaccagagcagagttgttg
gagctcatgatggtgcctaaatgcattgtatctcctcaatcaaacagaccagtaatggat
attgttcaagacacactattaggatgcagaaaaatcaccaagagagataccttcatcaca
aaggatgtatttatgaacattctaatgtggtgggaagatttcgacgggaatgttcctaca
ccagcaatattgaagccagaaccattgtggactgggaaacaagttttcaatcttattatt
cccaagcaaataaatttaactaggtattctagctggcatgatgataacgaaggaggatca
tcaataactccaggggatactatggtcagaattgaaaaaggggaactacttaccggaact
ctttgcaaaaagacacttggagcatctactggaagtctcattcatgtcatttgggaagac
gctggccccgatgcagctcgtaaatttcttggccacactcagtggcttgtaaactactgg
cttctgcagaattcttttagcattggaattggtgattcgattgcggacgcttcgactatg
gaggttattaaccagactatttcagaggcaaaagagaaagtgaaaacactatttagggat
gctcaagaaaagaagttggagtctgaacccggtcagacaatgatggatacatttgagaag
aaagtgaatgaggtgctgaacgaagctcgtaatgatgccgggaaaaaagcgcagacaagt
ttatctgagagcaataatctgaaagcaatggtgacagctggttccaaaggaagttttatc
aacatatctcagatgactgcttgtcttggtcaacagaatgttgaaggcaagcgaattcca
tttgggttcatagataggacactgccacactttacaaaagatgattatgggcctgaaagc
cgaggctttgtggagaactcgtatcttcgagggctgaccccacaagagttctttttccat
gccatgggaggtagggaaggtgttattgatactgcagtgaagacctctgaaactggatac
atccaaaggcggcttgtgaaggctatggaggatattatggtcaaatacgatggaactgtt
aggaactccgtaggagatgtcatacaatttctctatggagaagatggtatggatgctgtt
tggattgaaacacagaatcttgattccctgaaaatgaaaaagtcagactttgataggacc
tttaagtatgagtttgataaggagaactggaatcctagttacatgcttgaagggcctatt
gaagacttgaaatccagcatagagcttcgtaatttacttgaggatgaatttgaaatgctt
gaacatgatagacatctgcttgcaaatgagattgccactactggtactagttctcttcca
ctgcctgttaaccttaagaggcttatcaggaatgctcagaagacatttaagattgacttt
cgaaggccttctgatatggacccgattgaaattgtagaagctgttgataagctacaggag
agacttaaagttgttcctggtgatgatctccttagtcaagaagctcagaagaatgctact
ctcttgttcaatattttgctccgcagcacttttgctagtaaacgtgtcttggaagaacat
aggctctctcgtgaggcatttgagtggctagtgggagaaatagaatcaaggttcctgcag
tcacttgtagcctctggggaaatgattggttgtgtagcagcgcaatcaattggtgagcct
gctactcagatgactctcaacaccttccactatgcgatgactctcaacacattccactat
gctggtgtaagtgctaagaatgttacacttggtgttcccaggttaacagaaattattaat
gtggccaagagaatcaaaacaccttccttgtctgtgtatttgaaacctgaggttagtagg
acttcagaggaggccaaacgtgtgcagtgtgatttagagcttactacacttaggagagtg
acacaagctacagaggtgtggtatgatccagacccattgtatactgtaattgaagaagat
gttgattttgtgaagttgtacaatgaaatgcctgatgaagaagttgctcttgaaagaatg
tcaccttggttgcttcgcatagaattgaaccgagagatgatggtggataagaagttgagc
atggctgacattgctgaggagataaaacatgtgtttgatgatgatttgaaatgtattttc
aatgatgacaatgctgaaaagctcatacttcgtatccgaatcatgaatgatgaagcccac
cggggagagattcaggatgattctgctgatgatgttttcttaaagagaatagaaagcagc
atgcttactgagatgacattacgtggcatccctggcatcagcaaagtatttatgaaaagt
attgacgttccaaaatttgatgacaatgaaggttttcagactcataaggaatggatgctt
gaaactgatggtgtcaaccttttagctgcaatgtgccatgagcaagttgatgcaacaagg
agcataagcaaccaccttattgaaattattgaagtccttggaattgaggcagttcggcgg
gctcttctgaatgaattgcgtgctgtcatctcttttgatggatcttatgtcaattacagg
catctcgctattctttgtgatactatgacttatcgtggccatttgatgtcaattacgcgc
catggtatcaaccaaaatgataccggtccaatgatgagatgctcatttgaacagactgtt
gatattctccttgatgctgcagcatatgctgaggctgatcacttaaggggtgtcagcgaa
aacatcatgttaggccagcttgcgccccttggcactggacaatgctctctgtatcttaat
gatgagatgattaagaatgcatttgatctccagctacctagttatatggatggtcttgac
tttggcaagacacctgctcatttctccatgtcaactccctatcttgatggcttgatgtca
ccaactcatttgtccagtccaaatctgcggccatcaccaattaataatgcagttttttca
ccttatggaatggcctgtggttacagcgcatatcgaagtgactacagtatatcttcacct
gcttatgatccagtttcacctaagtacactcccacttctcctgtatatagccctgtgtca
ccaagttatagtcctctttccccaacttataccccgacgtctccggcatatagtcctata
tcacctgcatatagcccctcctctcctgggtacagccctacatcaccaagctatagtcct
atatcacctacatatagcccctcctctccttggtacagccctacatcaccaagctatagt
cctatatcacctatatatagcccctcctctcctgagtacagccctacatcaccaagctat
agtcctatatcacctgcatatatcccctcctctcctgggtacagccctacatcaccaagc
tatagtcctacttccccttattacagtcggttatctgcagagtatagtcccacatcacca
tactatagcccctcatcaccaacttattctccatccagcccaaaatttagtccaagcagt
ccggatttcagcctaacttctccacagttcagtgcttcaatggaatactcgccaagtcga
catggttactcaccgtcatcaaccagccaatacactccatagacaagtgccaaggatgag
gatgataatacaactctctga
DBGET
integrated database retrieval system
