Arachis duranensis: 107467386
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Entry
107467386 CDS
T04300
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107467386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107467386
03012 Translation factors [BR:
adu03012
]
107467386
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107467386
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107467386
Translation factors [BR:
adu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107467386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
dsrm
DEAD
HA2_C
HA2_N
nSTAND3
AAA_22
AAA_19
AAA_11
Dicer_dimer
ATPase
ATPase_2
AAA_23
NPHP3_N
TsaE
Motif
Other DBs
NCBI-GeneID:
107467386
NCBI-ProteinID:
XP_015941955
UniProt:
A0A6P4BLB6
LinkDB
All DBs
Position
9:112273835..112283122
Genome browser
AA seq
1197 aa
AA seq
DB search
MPFIILSSSQPSLLTAKALKPSIHAMKDRPTLSSYGAIYVPPHHRLRSVITSANYNSSAP
SVAKLRDHRGAALNPRPVVSAAPTTVHRSQTTLPEQIPDKGNSRFVSAYDDVVSEEGSDR
EFEAPSFRSASPNDNVDEWKRKLTLLLNDKSKQELLSREKKDRRDFDQIALLASRMGLYS
HMYAKVVVFSKVPLPNYRYDLDDRRPQREVSMPITLLRRVDAYFEEHLTRKSKMKESFSD
VSFTRSSSNSSIGTDEGLFEHPEPLASSKAVGEKILRRRSLQMHDQQQAWQESPEGRRML
EFRRSLPAYKEKEAILSLLSRNQVVVISGETGCGKTTQIPQFILESEIESVRGAACNIIC
TQPRRISAMSVSERVAYERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRN
LTGVTHVIVDEIHERGMNEDFLLIVLKDLLPHRPEMKLILMSATLDSELFSSYFNGAPVM
NIPGFTYPVRTHFLEDILEMTGYRLTTSNQIDDYGQERMWKMNKQVPRKRKSQIAYVVED
AIRAADFKDYSPQTQESLLCWNPDCIGFSLIEYILCMICENERPGAVLVFMTGWDDISTL
KEKFLAHPVLGDPNRVLLLTCHGSMGSSEQRLIFEEPKDGVRKIVLATNIAETSITINDV
VFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRRGRAGRVQPGVCYHIYPRCVYDAF
AEYQLPEILRTPLQSLCLQIKSLRLGSIPEFLSRALQSPEILAVQNAIEYLKIIGALDEN
ENLTTLGRFFPLSLSLSLSLILGAIFNCLDPILTVAAGLSVRDPFLTPLDKKDLAEAAKS
QFAGAYSDHLALIKAYEGWKDAELDMGGCEYCWKNFLSAQSMKAIDALRREFRCLLKDIG
LVDSNTANCNLWSCDVNLIRAVICYGLYPGICAVVHNEKSFSLKTMEDGQVLLYSNSVNA
RETRIPYPWLLFNEKIKVNSVFLRDSTAVPDAVVLLFGGNLLKGDADGHLKMLGGYLEFF
MEPPVADLYQCVKRELDDLIQRKLLFPKMSIHLYDELLSAVRLLISIDTCEGKFVFGRRV
FKPAKSTVMATSHPASISRTESGPGGDNSKSQLQTLLTRAGYAAPSYKTKQLKNNQFRAT
VEFNGMQIMGQPCSNKKSAEKDAAAEALQWLMGGKQSGSEYISHMSKLLKKSKKDHS
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcattattctctcttcttcacaaccttctttgttgaccgccaaagccctaaaa
ccttcgattcacgccatgaaggaccgccctacgctgtcctcttatggcgccatttacgtt
cccccgcaccaccgcctccgctccgtcatcacttccgccaattacaactcctccgctccc
tctgtagccaagctccgcgatcaccgtggtgcagctctaaaccctagacccgttgtttca
gctgctcctaccactgtgcatcgctcgcaaacgacgttgccggagcaaattcctgacaag
gggaattcgcgctttgtttcagcttacgacgacgtggtttccgaggaaggctccgatcgt
gaattcgaggctccctcatttcggagtgcttcaccaaatgataatgttgatgagtggaag
aggaagctaaccttgctcttaaacgacaagagtaagcaagagttgttgtccagggagaaa
aaggataggcgtgattttgatcaaattgcgcttttggcaagcagaatggggctgtatagc
cacatgtatgcaaaggttgttgtcttcagtaaggttccacttccaaactatagatatgac
ttggatgataggcggccgcagagggaggtgagcatgcctataactttgttaaggcgagtt
gatgcatactttgaggaacaccttacccgaaagtccaagatgaaggaaagcttttcagat
gtatcatttacaagatcaagcagtaacagtagtattggtacagatgaagggctttttgag
caccctgagccacttgcatctagtaaggctgttggggagaaaatacttaggcggaggagc
ttgcaaatgcatgatcagcagcaagcatggcaggaatctccagaaggaagaagaatgcta
gaatttcgcaggagtctccctgcttataaagagaaagaagcaatattgtctctcttatca
agaaatcaggtagttgtcatctcaggcgaaacaggttgtggcaagacaactcaaattcca
cagtttattttagaatctgagatagaatcagttcgaggagctgcttgtaatatcatatgc
acacaaccaagacgcatatccgctatgtctgtttctgaaagggttgcctacgagagaggg
gagaaattgggtgaatctgttggatataaagttcgattggagggtatgaaggggagagat
acccatcttctcttttgcaccacgggcatcttattaagaagattgctagctgatagaaac
ttaacaggtgtaactcatgttatcgtggatgaaattcatgagcgtgggatgaatgaagat
tttctgcttatcgtccttaaagatctccttccgcaccgacctgaaatgaaactgattttg
atgagtgctaccctagattcagagctcttctcttcttactttaatggggcaccagttatg
aatattccgggcttcacatatcccgttagaactcattttttggaggacattcttgaaatg
acgggctacagattgacaacttctaatcaaattgatgattatggtcaagaaaggatgtgg
aaaatgaacaaacaggtcccaagaaagaggaaaagccaaattgcttatgttgtcgaggat
gctattagagctgctgatttcaaagattacagcccacagacacaggagtctttgttgtgt
tggaatcctgattgtattggatttagtctcatagaatatatcctatgcatgatatgtgag
aatgaaaggcctggtgctgttttagtttttatgactggatgggatgatataagcactttg
aaagagaagtttttggctcatcctgtcttaggagatccaaatcgagttttgttgcttacc
tgtcatggctcaatgggcagttcagaacagaggttaatatttgaagaacccaaagatgga
gtaagaaaaatagtgcttgcaacaaatatcgctgaaacgagtatcacaataaatgacgtt
gtttttgtgcttgactgcggaaaagcaaaagaaacatcatatgatgcactgaataacacg
ccctgtttgcttccaacatggatctctaaggtttctgcccaacagagacgaggaagagct
ggtcgtgttcaacctggagtgtgttaccatatctatcctagatgtgtatatgatgcattt
gctgagtatcagttgccagaaattttgaggacacccttgcaatctctgtgtctgcaaata
aaaagtctaagacttggaagcatacctgagttcttgtctagggctttgcagtctccggag
atccttgcggtacaaaatgctattgagtatttgaaaataattggggctttggatgagaat
gagaatttgactactctaggtaggtttttccctctctctctctctctctctctctcgctt
atattaggggctatcttcaattgcctggatccaatattaactgtggctgctggtcttagt
gtgagagatcctttcctaacaccactggacaaaaaagaccttgcagaggcagcaaaatct
cagtttgctggagcatatagtgaccaccttgcacttataaaggcttacgagggttggaaa
gatgcagaattagacatgggaggatgtgaatattgctggaaaaattttctttcagcacaa
tcaatgaaagctattgatgctcttaggagagagttcagatgcctgctcaaggatattgga
ttagttgatagcaatacagccaactgcaacttgtggagctgtgatgtgaatcttatccgg
gcagttatttgctatggtctatatcctggaatttgcgctgttgtgcacaatgaaaagtca
ttctctttgaaaacaatggaggatggtcaagtgctcctatattcgaactccgtcaatgct
cgggaaactagaattccatatccatggttactttttaatgagaagataaaagtgaactct
gttttcctccgcgactcaacagctgtgcctgatgcagtggtgcttctgtttggtggaaac
ttattgaaaggggatgctgatggccacctaaaaatgttgggaggatatctggagttcttc
atggaacctcctgttgctgatctgtaccagtgtgtaaagagagaacttgatgacttaatt
caaagaaaactactttttccaaagatgagcatacacttgtatgatgaactcctatcagca
gtgcggttgctgatttccatagacacatgtgaaggcaaatttgtatttggtcgtcgggtc
tttaaaccagcaaagtcaacagtgatggccacatcacatccagcatcgatttcaaggact
gagagtggccctgggggtgataattctaaaagtcagctccagaccttactcacaagagca
ggatatgctgcacccagctacaagactaaacaattgaagaataatcagtttcgggctaca
gttgagttcaatggaatgcagataatgggccaaccctgtagcaataagaaaagtgcagaa
aaagatgctgcagctgaggccttgcagtggctaatgggtggaaaacagtcaggcagtgag
tatatcagtcacatgtccaagttgctaaagaaaagtaagaaggatcacagctga
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