Arachis duranensis: 107468283
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Entry
107468283 CDS
T04300
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
adu
Arachis duranensis
Pathway
adu03020
RNA polymerase
adu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107468283
09124 Replication and repair
03420 Nucleotide excision repair
107468283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107468283
03400 DNA repair and recombination proteins [BR:
adu03400
]
107468283
Enzymes [BR:
adu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107468283
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107468283
DNA repair and recombination proteins [BR:
adu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107468283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-GeneID:
107468283
NCBI-ProteinID:
XP_020988102
UniProt:
A0A6P5MS08
LinkDB
All DBs
Position
10:2954175..2961156
Genome browser
AA seq
1215 aa
AA seq
DB search
MDLEDEQEYEQQMEEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
NLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP
PSTMFVRMLSRASSKGGSSGQYIRATLPYIRSEIPIIIVFRALGFVADKDILEHICYDFS
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQVSILLSKNTVQCYFPX
VIFLSCVYKFDWAIIXACALXNLLHSLLXFVVKIVYFLLLXEISPAVIPQATKIFVNGCW
VGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLL
IKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAY
ADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAY
VLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSL
FFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGK
TTPISQEEAQGQAARYTRRDHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQI
GDKFSSRHGQKGTVGMTYTQEDMPWTIEGISPDIIVNPHAIPSRMTIGQLIECIMGKVAA
HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLK
HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD
AYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRML
TKEVKAAKDHKKKGA
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaagatgagcaagagtacgagcagcaaatggaggaggaggaggatgacgag
gaagagattactcaggaggacgcttgggctgtcatctccgcctacttcgaagagaaggga
cttgttcgccagcagctcgattctttcgacgagttcatccaaaacactatgcaggaaatc
gtggacgaatccgccgacatcgaaatccgccccgaatcccagcacaatcccggtcaccag
tccgattttgcagagactatttacaaaatcagcttcggtcagatttacttgagtaagccc
atgatgactgagtctgatggtgagactgctaccttattccccaaggcagctaggttgagg
aacctcacctattcggctcctttgtatgttgatgtcaccaaaagggttatcaagaaaggc
catgatggtgaagaagtcactgagacacaggatttcaccaaagtcttcattggcaaggtt
cctattatgcttcggtctagttattgcacattgtaccagaattcggagaaggatttgact
gagcttggggagtgcccctatgatcaaggtggatatttcattatcaatggtagtgaaaag
gttctgattgctcaggagaagatgagcaccaatcatgtatatgtcttcaagaagaggcag
cctaacaaatatgcctatgttgcggaggtccgctctatggcagagtctcagaatagacca
cccagtactatgtttgttcgcatgttgtctagggcgagctccaaagggggttcttcagga
caatatatacgtgctactcttccatacattcgatcagaaattccaatcattattgtgttt
cgagcattgggctttgttgctgacaaagatatacttgaacatatttgctacgacttctca
gacactcaaatgatggagttgcttcgtccatccttggaagaagcatttgtgattcaaaat
cagcaggttgcacttgactacattgggaaaagaggagcaactgtaggtgtaactaaggaa
aagagaattaagtatgctaaagagatcctccaaaaggagatgcttcctcatgttggtgtt
ggagaatattgtgagacaaagaaagcatactactttggatatatcattcaccggctactt
ctgtgtgcccttggacggagggctgaagatgatagggatcattatggcaacaaaaggctg
gacctggctgggcctttacttggtggtctctttagaatgctattcagaaagcttactaga
gatgtcaggggctatgtgcagaagtgtgttgataatgggaaagatgtcaacctgcaattt
gctatcaaagcaaaaaccatcacaagtggtcttaaatactcacttgctactggtaattgg
gggcaagcaaatgctgcgggtactagagctggagtatcacaggtgttaaatagattaact
tatgcttccactttgtctcacttgcgaagattgaattctcccatagggcgtgaaggcaag
ttggccaagccaaggcagctgcataattcacaatggggaatgatgtgtcctgcagaaaca
cctgaaggacaagtgagtattttgctttccaagaatactgtacaatgctactttccatga
gtgatctttctcagttgtgtttataagtttgattgggctatcatttaggcctgtgcattg
tgaaatttgcttcattctcttttatgatttgtggttaagattgtttattttctgcttcta
taggaaatttctcctgcagttattccccaagctaccaaaatttttgtaaatggttgctgg
gtgggcatccatcgtgatcccgacatgttggtcagaacattgagaaagctgagacgccgg
gttgatgttaatactgaagttggggttgttagagatatccgtcttaaagaattgcgtata
tatacagattatggtcgctgcagtcgtcctctattcattgtggacaagcaaaggctactt
ataaaaaagaaggatattcatgctttgcaacagagggaatccccggaggagggcggatgg
catgatcttgtgtccaagggcttcatagaatacatagacacagaagaagaagagacaact
atgatttcgatgactattaatgatcttgtgcaagcaagacttaatccagaagaagcttat
gctgatacttatactcattgtgaaatccacccgtcactgattttgggtgtttgtgcttct
attataccatttcctgatcacaatcagtctccacgtaatacatatcaatctgctatggga
aaacaagcaatgggaatttatgtaaccaattaccaatttcgaatggataccttggcatat
gtattatattatcctcagaaaccactggtgacaacaagagcaatggagcatctacatttt
cggcagctccctgctggaattaatgccattgtggccattgcctgttattctggttataat
caagaagattctgtcatcatgaaccaatcatcaatagatcgtggattcttccggtctctg
tttttccgatcatatagagatgaagagaagaagatgggaacccttgtcaaagaagatttt
ggtcgtccagataggaccaacaccatgggtatgaggcacggttcttatgataagctggat
gatgatggccttgcaccaccaggcacacgtgtatctggtgaggatgttattattggaaag
accaccccaatatctcaggaagaggcacagggacaagctgcacgttacacaagacgtgat
cacagcataagcttacggcatagtgaaacgggtattgttgatcaagttcttctgacaaca
aatgctgatggattaagatttgtgaaagtgagggtgagatctgttcggataccacagatt
ggtgataaattcagtagtagacatggtcagaaggggacagttggtatgacttacacgcaa
gaagacatgccctggaccattgaaggcatctcccctgacattattgtcaatccacatgct
attccttctcgtatgactattggccagcttatcgagtgtatcatggggaaggtagcagca
cacatgggaaaggaaggagatgcaactccttttacagatgttactgttgacaatatcagt
aaagctttacataaatgtgggtaccaaatgcgaggttttgagaccatgtacaatggtcat
acagggaggcggctatctgctatgattttcttgggtcctacatattaccaaagactgaag
catatggttgatgataagatccattctcgtggacgaggtcctgtgcagatcttgacaagg
caacctgctgaaggacgctcacgtgatggaggtctccgatttggggaaatggaacgagat
tgcatgatagcccatggagccgcgcacttcctaaaggagagattgtttgatcaaagtgat
gcatatagggttcacgtgtgtgagaaatgtgggttgatagctattgctaacctcaagaag
aattcttttgagtgcagggggtgcaagaacaaaactgacattgttcaggtttacattcct
tatgcttgtaagctgctcttccaagagctcatggctatggcgattgctccaagaatgctg
acgaaggaagtcaaagctgcgaaagatcacaagaagaaaggagcctga
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integrated database retrieval system
