Arachis duranensis: 107469470
Help
Entry
107469470 CDS
T04300
Name
(RefSeq) nuclear pore complex protein NUP88
KO
K14318
nuclear pore complex protein Nup88
Organism
adu
Arachis duranensis
Pathway
adu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107469470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107469470
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107469470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
MscS_porin
ATG16
Cluap1
V-SNARE
Motif
Other DBs
NCBI-GeneID:
107469470
NCBI-ProteinID:
XP_020989390
UniProt:
A0A9C6TMB3
LinkDB
All DBs
Position
10:23776486..23783547
Genome browser
AA seq
809 aa
AA seq
DB search
MRITLDPSSDPSPQPKRSPLTLTPTDELEWVPLPKHPLFSTSCAATTSPASSRNLLAWDG
ASRLYFWDYHANTLHRLSLRLGDPDPTSVLASSPSKVLQTDVELSFDVERISINRNGTAM
LLFGFYRLSVMYLYGRASKKDVNLICRTIAVGPETYSSGSNDIRVLQAIWHPYSDTHLGI
LSSDSVFRLFNLAVDPLLPEQEYYLQPVEPGRSRNASSVCPVDFSFGGDHLWDRFSVFIL
FSDGAIFVLCPVVPFGSHFKCESLLEIYNDAHTFGLKSANSLAASNSKLAISWLEATFPE
LLNQETEGDNHSLLRANAYAIFDASLVLQGPLRRVGQGRNEDSFGRSVECEGRAVSFLYN
LVSKDSILVTSWSGGQLQIDALADEVQPLWTVGSPPRLRVDSCDQILGLAMICEATAVDC
HDRLDHNAWLGNPPPLLRLAIVDLALPRRAESAYSISLFSDTLMPERIYSLHDGGIDSIV
LHFLPFTSQSNGKDDTMRTPSVHPVLNTCQSGCTSEPSLSGFLSLSDSFGYSWIVAVTLS
QECVVLEMKTWNLLLPISIDAEKPSIQAEGESKERDKPTIISKELLGGPKEVLVPQAAPS
LRSVAADSIEGRSTLHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIINDQQSRLGDAQQ
KLIKVEEKESMLQKRIERVTQMHNSLEERLQRLRNLPCAHKKPLSRAERQFKSELDHFRE
VELDALHSSVDALNERLRRHMQASTNASRQQQRIAGKKVGAGEDQMSMLKSSLEKLTLVN
TENSKKVKLVESTLKNKEKSSREPSLPLL
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcactctcgatccatcatcggatccaagtcctcaaccaaaacgctctcctctt
actcttactcccacagatgaactcgaatgggtcccactccccaaacaccctctcttctcc
acctcatgcgccgccacaacatcccccgcttcctccaggaaccttctcgcatgggacgga
gcctcccgcctctatttctgggactaccatgccaacactctccaccgcctctctctccgc
ctcggcgaccccgaccctacctccgttctcgcctcttccccctcgaaggtattgcaaact
gacgtggagctcagctttgatgttgagaggatctctatcaacagaaatggaactgcgatg
ctacttttcggtttttatagactctctgttatgtatctctatggacgtgcttccaagaaa
gacgtcaatttgatatgcaggaccattgcagttggtccagaaacttattccagcggcagc
aacgatattcgtgtattacaagcgatatggcacccttacagtgatactcatttgggaatc
ctttcttctgactcagttttccggcttttcaatctggctgtggatcctttgctgccagag
caagaatattatctgcaacctgtggagcctggtagatcaaggaatgcctcatcagtgtgc
ccagtagatttttcttttgggggtgaccatttatgggacaggttcagtgtttttatttta
ttcagtgatggagctatctttgtcctttgccctgttgttccatttggaagccacttcaaa
tgtgagtccttattagaaatatacaatgatgcacatacatttggcctgaaatcagccaac
tctttagcggctagtaattcaaaattggcaatctcctggttagaagcaacctttcctgaa
ttgctgaaccaagagacagaaggagacaaccattctttgctgagagctaatgcttatgct
atatttgatgcatcacttgtcttgcagggacctctgagaagagtaggtcagggtcgaaat
gaggattcatttggtcgtagtgttgaatgtgaaggtcgtgcagtcagttttctatacaat
ttagtcagcaaagactctattttagttacctcctggagtggtggacaattacagatagat
gctctagctgatgaggtccaacctctctggactgttggtagtccacctcgtctccgtgtt
gattcctgtgaccaaattcttggccttgctatgatttgtgaagcaactgccgttgactgt
catgatagacttgatcacaatgcctggttgggcaatccaccccctctgctgagactggct
attgtagatttggcactgccacgtagagcagaaagtgcttacagtatttctttgttcagt
gatactcttatgccagaaagaatatattcccttcatgatggagggattgattcaatagta
ttgcattttcttccattcacgagtcaatcaaatgggaaggatgatacaatgagaacgcct
tctgtgcatcctgttcttaatacatgccagagtggttgtacgtcagagccttcactctct
ggtttcctatcattgtccgattcatttggatattcgtggatagtggctgtcactctttct
caagaatgtgttgtcctagagatgaaaacttggaacctcttgcttccaataagcattgat
gcagagaagccgtcaattcaagcggaaggagaatcaaaagagagagacaaaccaactata
attagcaaagaactacttggtgggcccaaggaggtacttgttcctcaggcagctccatct
ttgcgttctgttgcagctgattcaattgaaggcagatctacattacatcagtatttcaag
ctgtttcatgaaacttatgtggagtatgcacataaggtgtatctggagctcaaacatcat
gcacctcagttgaagaaaatcattaatgatcaacagtctcgtttgggcgatgcacagcag
aaactcataaaagttgaggagaaagagtctatgttacagaaaaggatagaacgtgtaaca
cagatgcacaattccttggaagagcgtttgcagcgattaaggaacttaccttgtgcccac
aaaaaaccactgtctagagcggagcgacaatttaagtctgagcttgaccacttcagagaa
gttgagttggatgccttgcattcttccgttgatgcgctaaatgaaaggctaagaagacac
atgcaagcatccactaatgctagtcgccaacaacaaagaatagcagggaagaaagttggt
gctggggaggaccagatgtctatgctcaaatcatcccttgaaaaactcactctcgtaaat
actgaaaattcaaagaaagttaagcttgttgagtctactctgaaaaacaaagaaaaaagc
agcagagaaccaagcctgcctttgctttaa
DBGET
integrated database retrieval system
