Arachis duranensis: 107469525
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Entry
107469525 CDS
T04300
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
adu
Arachis duranensis
Pathway
adu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107469525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
adu04121
]
107469525
03036 Chromosome and associated proteins [BR:
adu03036
]
107469525
Ubiquitin system [BR:
adu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107469525
Chromosome and associated proteins [BR:
adu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
107469525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EIPR1
WD40_Gbeta
WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
MIOS_WD40
EIF3I
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
107469525
NCBI-ProteinID:
XP_015944381
UniProt:
A0A6P4C5N1
LinkDB
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Position
10:complement(66157113..66158742)
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AA seq
343 aa
AA seq
DB search
MDNSSQESQLRSDNSATYDSTYPLYAMALSSSSTSSNHQRIAVGSFIEEYTNRVDILSFN
PETLTLRPNPSLSFDHPYPPTKLMFHPSTPSSLLRHSAVDLLATSGDYLRLWEVRESSVE
ALSLFNNSKTSEFCAPLTSFDWNDIDPKRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV
YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
LMDSNKVVILDIRSPTMPVAELERHRGSVSAIAWAPQSSRHICSAGDDAQALIWELPTVA
GPNGIDPMSVYSAASEINQLQWSVAQPDWIAIAFANKMQLLRV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggacaactcctcccaagaatcccagctccgatccgataactccgctacctatgactcc
acttaccctctgtacgccatggccctctcctcctcttccacttcttccaaccaccaacgc
atcgccgtcggaagcttcatcgaagaatacacaaaccgcgttgacatcctctccttcaac
cccgaaaccctaaccctaaggcccaacccttctctctccttcgaccacccttaccctccc
acaaagctcatgttccacccctccaccccctcctcccttctccgccactccgccgtcgac
ctcctcgccacctccggtgactacctccgcctctgggaggtccgcgaatcctccgtcgag
gccctctccctcttcaacaacagcaagaccagcgagttttgcgcccctctcacctccttc
gattggaacgacatcgatcccaaacgcatcggaacctcaagcatcgataccacctgcaca
atctgggacatcgaaaagggcgtcgttgaaacgcagctcattgcgcacgataaagaggtt
tacgacattgcttggggtgaagcccgtgtcttcgcttcagtctccgctgatggatctgtt
cgaatcttcgatttgagggataaggagcactccaccatcatctacgagagcccccagccc
gatacgccattgctgcgtttggcgtggaacaagcaggatttgaggtacatggcgaccatc
ttgatggacagtaataaagttgtgatattggatattaggtctccgacgatgccagtggcg
gagttagagaggcaccgtgggagtgtgagtgcaattgcttgggctccgcagagttctagg
cacatttgttctgctggggatgatgctcaggctctgatttgggaattgcctactgtggct
ggacctaatgggattgatccaatgtctgtgtattctgctgcttctgagattaatcagttg
cagtggtccgtggcccagcccgattggatcgccattgcttttgccaacaagatgcagctt
ttgagggtttga
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integrated database retrieval system
