Arachis duranensis: 107472692
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Entry
107472692 CDS
T04300
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
adu
Arachis duranensis
Pathway
adu03013
Nucleocytoplasmic transport
adu03015
mRNA surveillance pathway
adu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107472692
09122 Translation
03013 Nucleocytoplasmic transport
107472692
03015 mRNA surveillance pathway
107472692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107472692
03041 Spliceosome [BR:
adu03041
]
107472692
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107472692
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107472692
Spliceosome [BR:
adu03041
]
Complex C
Other components
EJC/TREX
107472692
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107472692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
107472692
NCBI-ProteinID:
XP_015947681
UniProt:
A0A6P4C8H9
LinkDB
All DBs
Position
2:complement(1376797..1381014)
Genome browser
AA seq
426 aa
AA seq
DB search
MGELKDTEAYEEELIDYEEEDEKAPDSAKPAAESGKKGYVGIHSSGFRDFLLKPELLRAI
VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPLPGQVAALVLC
HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALT
RDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHEKQVMMFSATLSKEIRPVCK
KFMQDPMEIYVDDEAKLTLHGLVQHYIKLQESEKNRKLNDLLDALDFNQVVIFVKSVSRA
AELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGRQRILVATDLVGRGIDIERVNIVI
NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSTADSEVLNQVQSRFEVDIKELPEQIDT
STYMPN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaattgaaggataccgaggcttacgaggaagagctcatcgactacgaagaagaa
gatgaaaaagcccccgattctgcaaaacctgctgctgaatccggcaagaagggatatgtt
ggcatccatagctcaggattccgagacttcctgttgaaacctgagcttcttcgagctatt
gtcgattcaggattcgagcatccatccgaagtgcaacacgagtgcatccctcaagcaatt
ttaggaatggatgtcatttgtcaagcaaaatctgggatgggaaaaactgcagtttttgtt
ctttcaacacttcagcaaatcgatcctcttcctggtcaagttgcagctcttgttctttgc
catacgagagagctagcttatcagatttgccatgaatttgaaaggttcagcacatatctt
cctgatatcaaagttgctgttttctatgggggtgtcaatattaaggttcacaaagaattg
cttaagaatgaatgtcctcatattgtggttggaacacctgggaggattcttgccctgact
agagataaggaccttggcttaaagaatgtgaggcattttattcttgatgagtgtgacaag
atgcttgaatcacttgacatgaggagagatgtgcaagagattttcaaattgactccccat
gaaaagcaagtcatgatgttttctgctacactcagcaaagagatccgacctgtttgcaag
aaatttatgcaagatccaatggaaatttatgtggatgacgaggccaagttaacacttcat
ggtcttgttcagcactatatcaaattgcaagaatcggagaagaatcgtaagttgaatgat
cttcttgatgctctggacttcaaccaagttgttatttttgtaaaaagtgttagcagagct
gcagagttgaacaagttgctcgtggagtgcaacttcccttcaatatgtatacattctgga
atgtcacaggaagaaaggttgaaacgatacaaaggcttcaaagaagggaggcaaaggatt
cttgttgcaacagacttagtaggaaggggtatcgacatagaacgggttaacatagttatc
aactatgacatgcctgattctgctgacacttacctgcacagggtaggaagagctggtaga
tttggcaccaaggggcttgcaattacttttgtctcttcaacagctgactctgaagttctt
aatcaggtgcaatcaaggtttgaagttgatataaaggagcttccagaacaaattgacacc
tccacatatatgccaaactga
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