Arachis duranensis: 107472898
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Entry
107472898 CDS
T04300
Name
(RefSeq) uncharacterized protein LOC107472898 isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
adu
Arachis duranensis
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107472898
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107472898
5.6.2.5 RNA 5'-3' helicase
107472898
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107472898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
UvrD_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
107472898
NCBI-ProteinID:
XP_015947905
UniProt:
A0A6P4C0U6
LinkDB
All DBs
Position
2:complement(4913132..4965452)
Genome browser
AA seq
1386 aa
AA seq
DB search
MGSRGRPLFDLNEPPAEDNDESDGIICLQPQMTQPSTNPNSSDLFAASSAAQGIINNHAF
SHASSVSGFQPFVRPKSSSCIPDVDAVSKGAEEQDTNASSKSGKEDDLKVMDSRILSSTT
AQSTEREEGEWSDDEVSADVNGSHNLLQQSQVSQEQTTSGMVDGGGVASESKSGNITSES
KSGNTKGPDSTIDEKSSRASVGLESNSTEQKSNIVPNSDGSIKSEASNDAQEEPSLIPKQ
KEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPMKSSTPRR
QNFSSPIITRTVKEVRNVAAQVERVGAAKDQKQVETSFAEGGIHADLHEPKSDSNGDNSG
PLGRSRRLNSETEPPAEVNLPPIPRQGSWKQPTDSRQQKNVLGSSRKLGQTGQSSNSNDV
KVGNKKHAPMKKQTPVSIQPQDTSVERLIREVTSEKFWHHPEETELQCVPGRFESVEEYV
RVFEPLLFEECRAQLYSTWEESMETVSRDTHIMVRVKANESRERGWYDVKLLPPLHDFKW
PFKEGDVAVLSSPRPGSVRSKQSSASLAQDDGEAEITGRVVGTVRRHKPIDTRDPTGAIL
HYYVGDSYDPIRVDDDHIIRKLQIGSIWYLTILGSLATTQREYVALHAFRRLNSQMQTAI
LQPSPEHFPKYEQQTPAMPECFTPNFVDHLRRTFNEPQLAAIQWAATHTAAGTSSGTTKR
QEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQANEISSDNA
PMGSIDEVLQNMNQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYR
PDVARVGVDSQTRAAQAVSVERRTEQLLGKSQEEVLGWMHQLKNREAQLTQQLHCLHREL
NATAAAVRSQGSVGVDPDVLMARDQSRDALLQNLAAVVEGRDKVLVEMSRLALLESRFRP
GSGFNWEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVL
PPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQ
IRDFPSRYFYQGRLTDSESVVKLPDEVYHKDPLLRPYIFYDIRHGRESHRGGSVSYQNIH
EAQFCLRLYEHLQKTLKSLGMGKISVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTV
DAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSDDWAA
LIIDAKSRNCYMEMDSLPKDFMVSKGPTYTPLPGKASSNMRGMRSGGQRFRGMEAHGDPR
MGAPCEDDEKMGAPASFRNGNHRSSRYPMENSLDDFDHMGDKSRDSWQYGAQKKQNSAGN
GGKRDV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcgaggaaggccattatttgatctcaatgagccacctgcagaagataatgat
gagagcgatggtattatttgtctccagccccaaatgactcagccatcaacaaatcctaac
tcttctgatttatttgcagcatcatctgctgcccaaggaataataaataatcatgctttt
tcacacgcgtcatctgtctctggatttcaaccttttgttcggcctaaatcctcctcttgt
atccctgatgtagatgctgtatcgaagggagcagaagaacaagatacaaatgctagttct
aagtctggcaaagaggacgatttgaaagttatggattcacggatactaagttcaacaact
gctcaatccacagagagggaagaaggggaatggtctgatgacgaggtctctgccgatgta
aatggatctcataatttgctccaacaaagtcaagtgtcgcaagagcaaacaacatctggg
atggtggatgggggtggagtggcttctgaaagtaagtctggcaatattacttctgaaagc
aagtctggtaatactaaaggtcctgatagtacaattgatgaaaagagtagccgtgcctct
gtaggtctagagtcaaattctactgaacagaagagcaacattgtcccaaattcagatggc
agtataaaaagtgaagcttctaatgatgctcaagaggagccaagtttaattcctaagcaa
aaagaagtgaaaggtattgaagctagtcatgctcttaggtgtgcaaataatcctgggaaa
agaaagattgaccagcgcaaagaggaaatgttgggaaagaaacgaaatagacagactatg
tttcttaacttggaagatgtcaagcaggcaggtcctatgaaatcttcaacaccaagaagg
cagaatttttcatcccctattataactcgtaccgtaaaggaggtccgtaatgttgctgca
caagttgagcgtgttggagcagctaaggatcagaaacaggttgagacatcttttgctgaa
ggtggcatccatgctgacttacatgaacctaaatctgattctaatggtgataattctgga
ccacttggtaggtctaggaggctaaacagtgagacggaacctccggcagaggttaattta
ccacccattccaagacagggttcatggaaacaaccaacagattcaagacagcagaagaat
gtacttggttcaagtaggaagttggggcagactggtcaaagctccaactccaatgatgtc
aaggtgggaaacaaaaaacatgctcctatgaagaagcagactcctgtcagcatccagccc
caagacacatctgttgaacgccttatacgggaggttaccagtgaaaaattttggcaccac
ccagaggaaactgagctacaatgtgtccctggacggtttgagtcggtcgaagagtatgtc
agagtatttgaacctttactctttgaggaatgtcgggctcaattatacagtacatgggaa
gaatcaatggagacagtatcaagggatactcatattatggtgagagtaaaagcaaatgaa
tcaagagaaagaggatggtatgatgtgaaactacttcctccattacatgacttcaaatgg
ccatttaaggagggagatgttgcagtcctatcatctcctaggcctggatcagtcaggtcc
aagcagagcagtgcatctttagctcaggatgatggggaagcggaaatcactggacgagtg
gttggaacagttaggcgacacaaacctattgatacccgtgatccaactggtgcaattctc
cattattatgttggggactcttatgatcctatcagggttgatgatgatcatatcataaga
aaacttcaaattggaagcatttggtacctcacaatacttggatctcttgctaccacacag
agggagtatgttgctctacatgcatttcgtcgcttaaattcacagatgcaaactgctatc
cttcagcctagtcctgaacacttccctaaatatgagcagcagacccctgccatgcctgaa
tgctttacaccaaactttgttgatcatcttcgtaggacctttaatgaaccccagttggca
gcaatccaatgggctgccacgcatacagctgctggtacaagtagtggaacaacaaaaagg
caagaaccgtggccctttacccttgttcagggacctccaggaacaggaaagacgcatact
gtatggggaatgttgaatgtcattcaccttgtgcagtatcagcattactacacctccttg
cttaagcatgtagccccggaaagctacaagcaagctaatgagatcagttcagataatgca
cccatgggatctattgatgaagttcttcaaaacatgaaccagaatctcttgcgtactttg
cctaagttggtccccaaacctagaatgttggtttgtgctccatctaatgctgccactgat
gagcttcttgctcgtgtccttgatcgtggatttattgatggtgagatgaaagtatatcga
cccgatgtggctcgagttggggttgattctcagacacgtgctgcccaagcagtttctgtt
gagcgtagaactgaacagcttttgggcaagagtcaggaggaagttcttggatggatgcat
cagttaaagaatcgcgaggctcagttgactcagcagttacattgtcttcatagagaactt
aatgctactgccgctgcagttcgttcccaaggatctgttggtgttgaccctgatgttctc
atggccagggatcagagtcgggatgctctactgcaaaatcttgctgctgtagttgaagga
agggacaaggttttggttgagatgtctcgccttgcgcttttggaaagtaggttccgacct
ggtagtggtttcaattgggaagaggcccgtgccagtttggaggccagttttgccaatgaa
gcagagatagttttcactacagtttccagcagtggtcgcaagttgttctctcgtctttcc
catggctttgatatggtggtcattgacgaggcagctcaagccagtgaggtgggagttctg
cctcccctctctcttggtgcagctcgatgtgttctggtcggagatcctcagcagcttcct
gctacagttattagcaaggctgctggaacattgatgtacagtaggagtctttttgagaga
ttccaacaagcaggttgcccgacaatgttgttgtctgtgcagtatagaatgcatccccaa
attcgagatttcccttctaggtacttctatcaggggcgacttactgacagtgaaagcgtg
gttaaattgcctgatgaggtataccacaaggaccctttacttagaccttatatattctat
gatatcagacatggacgggagtctcacaggggtggatcagtctcttatcaaaacatacat
gaagcacaattttgtctccgattgtatgagcatcttcagaaaactttgaaatctttgggt
atgggaaagattagtgttggcataattactccttacaagctgcagctgaaatgcctccag
cgtgaatttgaggaagtcttaaattcggaagaagggaaggacctatatattaatactgta
gatgctttccaaggtcaagaacgagatgtcattataatgtcgtgtgtgcgtgcttctagt
catggtgttggctttgttgcagatattagacggatgaatgttgcacttacacgtgcaagg
agggccctttgggtcatgggaaatgcaaatgctctggtacaatctgatgattgggctgcg
ttgattattgatgcaaaatcccgaaattgctatatggagatggactcccttccgaaggac
tttatggtatcgaagggacctacttacacgccactgcctggtaaggcttcctcaaatatg
aggggcatgagatcaggtggacaaaggtttagaggaatggaggcgcatggggatcccagg
atgggcgcaccatgtgaagatgatgaaaagatgggtgcaccagcaagcttcagaaatggg
aatcatcgatcttcaagatatccaatggagaattctttagacgattttgaccatatgggc
gataaatccagagattcctggcagtatggtgcacagaagaagcagaactctgctggaaat
gggggaaagagagatgtgtaa
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integrated database retrieval system
