Arachis duranensis: 107474370
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Entry
107474370 CDS
T04300
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
adu
Arachis duranensis
Pathway
adu03040
Spliceosome
adu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107474370
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107474370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adu03041
]
107474370
04121 Ubiquitin system [BR:
adu04121
]
107474370
03400 DNA repair and recombination proteins [BR:
adu03400
]
107474370
Enzymes [BR:
adu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107474370
Spliceosome [BR:
adu03041
]
Complex B
Other components
Prp19 complex
107474370
Complex C
Prp19-CDC5 complex
107474370
Ubiquitin system [BR:
adu04121
]
Ubiquitin ligases (E3)
U-box type E3
107474370
DNA repair and recombination proteins [BR:
adu03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
107474370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_DCAF4
RMC1_N
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
U-box
WD40_like
zf-Nse
Beta-prop_VPS8
Beta-prop_ACSF4
eIF2A
PAS_11
Beta-prop_NWD2_C
TRAPP14_N
PUMA_CC
Beta-prop_Nup120_160
V_ATPase_I_N
Motif
Other DBs
NCBI-GeneID:
107474370
NCBI-ProteinID:
XP_015949478
UniProt:
A0A6P4CD77
LinkDB
All DBs
Position
2:complement(37562180..37572821)
Genome browser
AA seq
524 aa
AA seq
DB search
MNCSISGEVPEDPVVSKKSGLLFEKRLIETHIADYGKCPITGEPLTLDDLVPIKTGKIVK
PRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLATAERPFPVSANAIPANVSGLSNGKRAAEDDEMAHGGKKMHPGITSAIISE
LTDCNAALSQQRKKRQISTTLAPVESIEAYTQISSHPFHKTNKPGIISLDILYSKDLIAT
GGIDMNAVIFDRPSGQILSTLSGHSKKVTSVKFVAQGESLLTSSADKTVRVWQGSEDGNY
NCKHILRDHTAEVQAVTVHATNNYFVTASLDGTWCFYDLSSGTCLTQVADTSGSSEGYTS
AAFHPDGLIIGTGTTDALVKIWDVKNQSNVAKFDGHTGSVTAISFSENGYFLATAAHDGV
KLWDLRKLKNFRNFAPYDSETPTNSVEFDHSGSYLAVAGSDIRIYQVANVKSEWNCIKTF
PDLSGTGKVTCVKFGPDSKYIAVGSMDRNLRIFGQPSEDTPTES
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaactgctccatttccggcgaggtgccggaagacccagtggtgtctaagaaatccggt
cttctttttgagaagcggttaattgagacgcacatagcggattatggaaaatgtccaata
actggagaaccccttacgttggatgatcttgtaccaatcaaaacaggcaagatagtgaag
cccagaccagtgcaggcagctagcatccctggcatgcttggaatgttccaaaatgaatgg
gatgggttgatgctatctaattttgcattggagcaacaattgcacacagccaggcaagag
ctaagtcatgctttatatcagcatgatgctgcatgtcgagtgattgcaagacttaaaaag
gaacgtgatgaagctaggtcattgcttgcaacagcggaaaggccattcccggtgtcagcg
aatgctataccggcaaatgtctctggcttgagcaatgggaaaagagctgctgaggatgat
gagatggcacatggtggaaagaaaatgcatcctggaataacttctgcaataatttctgag
ctaactgactgcaatgctgctctttcccagcagaggaaaaagcgacagatttctacaaca
ttggctcctgttgaatctatagaggcttatacccagatatctagccaccccttccacaaa
acaaacaaaccgggcattatatctcttgatatcctgtattctaaggacttaattgcaact
ggcggtattgatatgaatgctgttatttttgacagaccatcaggacaaatattatctaca
ctcagtggtcattctaaaaaggtaaccagcgtaaagtttgtagctcagggcgaatcgtta
ttaaccagttcagcagataagacggttcgtgtgtggcaaggctcggaggatggtaactat
aactgcaaacacatcctgagggatcatacagctgaggtacaagctgtcactgtccacgcc
accaataactactttgtgactgcttcacttgatggcacttggtgcttttatgatctgtct
tcaggaacatgtctgactcaggttgcagacacttcaggttcttctgaaggctatacttct
gcagcttttcatcctgatgggctcattattggaactggcaccacagatgctcttgtaaag
atctgggatgtaaaaaatcagtcaaatgttgctaaatttgatggacatacaggatcagta
actgccatatccttctctgagaatgggtacttccttgcgactgcggctcatgatggtgta
aagctttgggatctacgcaaattaaagaacttccgaaattttgctccgtatgactcggaa
actccgacaaactcagttgagttcgatcacagtggatcttaccttgcagttgcaggctct
gatatcaggatttaccaagtcgcaaatgtgaaatctgaatggaactgtatcaaaactttc
ccagatttatctggaacagggaaagtcacctgtgtaaaatttggtccagattcaaaatac
atagcagtggggtcaatggatcggaatcttcgaatatttggccaacctagtgaagatact
ccaaccgagtcgtaa
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