KEGG   Arachis duranensis: 107474370
Entry
107474370         CDS       T04300                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
adu  Arachis duranensis
Pathway
adu03040  Spliceosome
adu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:adu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107474370
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107474370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:adu03041]
    107474370
   04121 Ubiquitin system [BR:adu04121]
    107474370
   03400 DNA repair and recombination proteins [BR:adu03400]
    107474370
Enzymes [BR:adu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107474370
Spliceosome [BR:adu03041]
 Complex B
  Other components
   Prp19 complex
    107474370
 Complex C
   Prp19-CDC5 complex
    107474370
Ubiquitin system [BR:adu04121]
 Ubiquitin ligases (E3)
  U-box type E3
   107474370
DNA repair and recombination proteins [BR:adu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    107474370
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WD40_Gbeta EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_WDR19_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_DCAF4 RMC1_N Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N U-box WD40_like zf-Nse Beta-prop_VPS8 Beta-prop_ACSF4 eIF2A PAS_11 Beta-prop_NWD2_C TRAPP14_N PUMA_CC Beta-prop_Nup120_160 V_ATPase_I_N
Other DBs
NCBI-GeneID: 107474370
NCBI-ProteinID: XP_015949478
UniProt: A0A6P4CD77
LinkDB
Position
2:complement(37562180..37572821)
AA seq 524 aa
MNCSISGEVPEDPVVSKKSGLLFEKRLIETHIADYGKCPITGEPLTLDDLVPIKTGKIVK
PRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLATAERPFPVSANAIPANVSGLSNGKRAAEDDEMAHGGKKMHPGITSAIISE
LTDCNAALSQQRKKRQISTTLAPVESIEAYTQISSHPFHKTNKPGIISLDILYSKDLIAT
GGIDMNAVIFDRPSGQILSTLSGHSKKVTSVKFVAQGESLLTSSADKTVRVWQGSEDGNY
NCKHILRDHTAEVQAVTVHATNNYFVTASLDGTWCFYDLSSGTCLTQVADTSGSSEGYTS
AAFHPDGLIIGTGTTDALVKIWDVKNQSNVAKFDGHTGSVTAISFSENGYFLATAAHDGV
KLWDLRKLKNFRNFAPYDSETPTNSVEFDHSGSYLAVAGSDIRIYQVANVKSEWNCIKTF
PDLSGTGKVTCVKFGPDSKYIAVGSMDRNLRIFGQPSEDTPTES
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgaactgctccatttccggcgaggtgccggaagacccagtggtgtctaagaaatccggt
cttctttttgagaagcggttaattgagacgcacatagcggattatggaaaatgtccaata
actggagaaccccttacgttggatgatcttgtaccaatcaaaacaggcaagatagtgaag
cccagaccagtgcaggcagctagcatccctggcatgcttggaatgttccaaaatgaatgg
gatgggttgatgctatctaattttgcattggagcaacaattgcacacagccaggcaagag
ctaagtcatgctttatatcagcatgatgctgcatgtcgagtgattgcaagacttaaaaag
gaacgtgatgaagctaggtcattgcttgcaacagcggaaaggccattcccggtgtcagcg
aatgctataccggcaaatgtctctggcttgagcaatgggaaaagagctgctgaggatgat
gagatggcacatggtggaaagaaaatgcatcctggaataacttctgcaataatttctgag
ctaactgactgcaatgctgctctttcccagcagaggaaaaagcgacagatttctacaaca
ttggctcctgttgaatctatagaggcttatacccagatatctagccaccccttccacaaa
acaaacaaaccgggcattatatctcttgatatcctgtattctaaggacttaattgcaact
ggcggtattgatatgaatgctgttatttttgacagaccatcaggacaaatattatctaca
ctcagtggtcattctaaaaaggtaaccagcgtaaagtttgtagctcagggcgaatcgtta
ttaaccagttcagcagataagacggttcgtgtgtggcaaggctcggaggatggtaactat
aactgcaaacacatcctgagggatcatacagctgaggtacaagctgtcactgtccacgcc
accaataactactttgtgactgcttcacttgatggcacttggtgcttttatgatctgtct
tcaggaacatgtctgactcaggttgcagacacttcaggttcttctgaaggctatacttct
gcagcttttcatcctgatgggctcattattggaactggcaccacagatgctcttgtaaag
atctgggatgtaaaaaatcagtcaaatgttgctaaatttgatggacatacaggatcagta
actgccatatccttctctgagaatgggtacttccttgcgactgcggctcatgatggtgta
aagctttgggatctacgcaaattaaagaacttccgaaattttgctccgtatgactcggaa
actccgacaaactcagttgagttcgatcacagtggatcttaccttgcagttgcaggctct
gatatcaggatttaccaagtcgcaaatgtgaaatctgaatggaactgtatcaaaactttc
ccagatttatctggaacagggaaagtcacctgtgtaaaatttggtccagattcaaaatac
atagcagtggggtcaatggatcggaatcttcgaatatttggccaacctagtgaagatact
ccaaccgagtcgtaa

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