Arachis duranensis: 107475933
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Entry
107475933 CDS
T04300
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
adu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107475933
09123 Folding, sorting and degradation
03018 RNA degradation
107475933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107475933
03041 Spliceosome [BR:
adu03041
]
107475933
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107475933
mRNA degradation factors
5'-3' decay
Lsm complex
107475933
Spliceosome [BR:
adu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107475933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
107475933
NCBI-ProteinID:
XP_015951102
UniProt:
A0A6P4CGF0
LinkDB
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Position
2:89972816..89975121
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AA seq
150 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGRGRGRGREDGPGGRPAKGMGRGLDE
GGAKGPGGGRGRGGPGGKPGGNRGAGRGRG
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctttctcttctgaagactgcccaaggtcacccaatgttggtggagctgaaa
aatggagagacttataacgggcatttggtgaattgtgatacatggatgaacatccatcta
agagaagtcatttgtacctctaaagacggagatagattttggcgaatgccggaatgctac
attcgtggaaacacaatcaagtatcttcgagttcctgatgaggttattgacaaagttcag
gaagaaaccaagagccgtggagatcgcaaaccgcctggtgttggacgtggaaggggaagg
gggagagaggatggtcctggtggacggccagcaaaaggaatgggccgtggccttgacgaa
ggtggagctaaagggccaggaggaggccgaggcagggggggtccaggtggaaagcctggt
ggtaacagaggtgcagggagaggtagaggttga
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