Arachis duranensis: 107476910
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Entry
107476910 CDS
T04300
Name
(RefSeq) uncharacterized protein LOC107476910 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107476910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
adu03000
]
107476910
03019 Messenger RNA biogenesis [BR:
adu03019
]
107476910
04121 Ubiquitin system [BR:
adu04121
]
107476910
Enzymes [BR:
adu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107476910
Transcription factors [BR:
adu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
107476910
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107476910
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107476910
Ubiquitin system [BR:
adu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107476910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
Nab2-like_zf-CCCH_
zf-UDP
Rtf2
Motif
Other DBs
NCBI-GeneID:
107476910
NCBI-ProteinID:
XP_015952340
UniProt:
A0A6P4CJU4
LinkDB
All DBs
Position
3:1942587..1949200
Genome browser
AA seq
1025 aa
AA seq
DB search
MSDEGERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACRSPY
DKEKIVGMAANCERLVNEIHMEKKMKNQKAKTKSSDGRKQLSSVRVIQRNLVYIVGLPLN
LADEELLQRREYFGQYGKVLKVSMSRTAAGVIQQFPNETCSVYITYSKEEEAIRCIQNVH
GFVLEGRPLRACFGTTKYCHAWLRNAPCSNPDCLYLHEVGSQEDSFTKDEIISAYTRSRV
QQITGATNNMQRRSGSILPPPFDDGMNNSLAKPIVKNASSNSVCTVRGSPPNGFCGRPGA
LPSSSSWGTQTTNCQPSAGGQSCQNGPAKAKPDTVGSSLPFSAAVVGTVQASALHCDVTK
RPPSGDGSHGMPGVKNGLLKPIKQYNSVDIVASTGDKTLASDISPVPTKLNSQLSSLTSQ
DSDRGSCTTLNTVNSTYITGQSCSSGPEEAVTATNEEIQNLSCELSSIDIDGDAAKENSS
ITKPSSPPSDFLIKSPEIQGTQHNVDKFRDLITSNEAGKGASSDNGVCSSREHLDWRLDS
HSQLVSDSVEDDVASFDNQRLKDPEVVCRSYLPKSTSFLHVSSHSSPHLQQLGESCTGAN
AGSVSANERDGNEYLSNSSVYSGYPEKLVSSSSYGFLDERNRQSIGRLVSEAVNTGRDCA
IDKGESSIISNILSMDLDPWDDSMTSPHNLAKLLGDNTENQSGSMKKSSSWKVQSNNQSR
FSFARQEESKFQSHDVHPSYGVSQPQLKTSSVIHDFVEGDYYMDKLGIANGFSTSNFEDA
ENISSGHFLHSNNKLSAVSRAQVSAPPGFSVPSRPPPPGFSSHERVEQAFDSMPGNSLLD
HSSFLRNSYQTAPTGNIGGAGDIEFMDPAILAVGKGRFQGALNTPALDMRSNLMPQLNYF
DNNEARLQLLMQRSLSQPQQNLRFPDIGNTFSQLGDSYGISSRLDQSQVSNISPYPQMSL
QQSTNAVMSNGQWDGWNEMQSGNNLGVAELLRNERFGFNKFYSGYDDSKYRMPNSGDLYN
RTFGM
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaaggagaaaggacttgtcctctctgtgctgaagagatggatttgaccgat
cagcagttgaagccatgcaaatgtggttatgagatatgtgtctggtgctggcaccacata
atggacatggctgaaaaggatgacacagagggtcgatgccctgcatgtcgttccccttat
gataaggaaaagattgttgggatggctgcaaactgtgagagattggtgaatgagattcat
atggagaaaaagatgaagaatcagaaagcaaagactaaatcttctgatggcaggaagcag
ctcagtagcgtgcgagtgattcagcgcaaccttgtttacatagttgggttgcctctcaac
ttggcagatgaagaacttctccagcgccgagaatattttggtcagtacgggaaggtctta
aaagtgtcgatgtcgcggacagctgctggtgttattcagcagtttccaaatgagacatgc
agtgtatatattacttattcaaaggaggaagaagcaattcgctgtattcaaaatgtacat
ggatttgttttggagggtagacctctaagggcttgttttggaaccacaaaatattgtcat
gcatggctccgaaatgcgccttgcagcaatcctgattgtttatacctacatgaggttggc
tctcaagaagatagttttacaaaagatgaaataatttcagcatacaccagaagtcgagtt
cagcaaatcactggtgccacaaacaacatgcaaaggaggtcggggagtatattacctcca
ccgtttgatgatggcatgaataactccttggcaaagcctattgttaaaaatgcttcaagt
aactctgtatgcacggtaagaggttcacctcctaatggattttgtgggagacctggagct
cttccttctagttcttcatggggaacccaaactacaaattgtcagccctctgcgggaggt
caatcatgtcaaaatggaccagccaaggcaaaacctgatacagttggcagctcactacct
ttttcagctgctgttgttggtacagttcaggcttctgcattgcattgtgatgtgacaaaa
aggccaccatcaggtgatgggagtcatggtatgcctggagtgaaaaatgggctgttgaaa
cccattaaacaatacaatagtgtcgacattgtggctagtacaggtgataaaactttggct
tcggatatttctcccgtgcctacaaaattgaatagccagttgtcttctctgacttctcaa
gatagtgatagaggtagttgtactacactaaacaccgtaaattccacttacatcactgga
caatcatgcagctctggtcctgaggaagcagttactgctaccaatgaagagattcagaat
ttgtcctgtgagttatcctccattgacattgatggagatgctgcaaaagaaaattccagc
ataaccaaacctagtagcccgccttctgatttcttgattaaatctcctgaaattcaagga
acacagcataatgttgacaagtttagagatttaataacttcaaatgaggctggtaaaggt
gctagctcagataatggggtttgtagttcaagggaacatttagattggagattggattct
cattcacaattagtttcagatagtgttgaagatgatgtagcatcttttgataatcaaaga
cttaaggatccagaagttgtttgccgatcttatttgccaaagtcaactagtttccttcat
gtatcaagccattctagccctcatcttcagcagcttggtgaatcatgtactggtgcaaat
gctggttctgtgtcagctaatgaaagagatgggaatgaatatctttcaaattcctctgta
tatagtggataccctgaaaaattggtcagcagcagttcttatggtttccttgatgaaagg
aacagacaaagcattggaagattagttagtgaagcagttaatactggacgagattgtgct
attgataagggtgagagtagtataatttcaaatatattgtctatggacttggatccatgg
gatgattcaatgacatcaccgcataatttagctaagttgttgggtgacaacactgaaaac
cagtctggttcgatgaagaaatctagctcctggaaagttcagagtaataatcaatctaga
ttctcttttgcgaggcaggaggaatccaaatttcaatcccatgatgtgcatccatcttat
ggtgtgagccaaccacagctaaagacgtcctcggtcatccatgattttgtggaaggagat
tactatatggataaattgggcatagcaaatggtttttccacaagtaattttgaggatgct
gaaaatatcagcagtggtcattttcttcactctaataacaagctttcagctgtttcaaga
gcacaggtttcagccccaccaggattttcagttccaagcaggccgccaccaccgggcttt
tcttctcatgagagagtggagcaggcttttgactcgatgcctgggaattcattgcttgac
cattcctcttttttgagaaattcatatcaaacagccccaactggaaatatcggtggtgca
ggggatattgaatttatggaccctgctattttggctgttggtaaagggagatttcaaggg
gcactaaacaccccagcacttgacatgcgatctaatctcatgccacagttaaattacttc
gacaataatgaggccagacttcaattattgatgcaaagatctctctcacagcctcaacag
aatcttcgatttccggatattgggaataccttttctcagcttggagattcttatggtata
tcttcaaggttagaccaatcccaggtcagtaatatttccccataccctcagatgtctctg
cagcaatctacgaatgcagtcatgtcaaatgggcagtgggatgggtggaatgagatgcaa
agtggaaataatctaggcgtggctgaacttttgagaaatgaaagatttggatttaataaa
ttttactcgggatatgatgattcaaaatatcggatgccaaattctggtgatctgtacaat
agaacatttgggatgtga
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