Arachis duranensis: 107479089
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Entry
107479089 CDS
T04300
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
adu
Arachis duranensis
Pathway
adu03030
DNA replication
adu03420
Nucleotide excision repair
adu03430
Mismatch repair
adu03440
Homologous recombination
adu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107479089
03420 Nucleotide excision repair
107479089
03430 Mismatch repair
107479089
03440 Homologous recombination
107479089
03460 Fanconi anemia pathway
107479089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
adu03000
]
107479089
03032 DNA replication proteins [BR:
adu03032
]
107479089
03400 DNA repair and recombination proteins [BR:
adu03400
]
107479089
Transcription factors [BR:
adu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107479089
DNA replication proteins [BR:
adu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107479089
DNA repair and recombination proteins [BR:
adu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107479089
MMR (mismatch excision repair)
107479089
DSBR (double strand breaks repair)
HR (homologous recombination)
107479089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
OB_MEIOB_N
DUF223
Motif
Other DBs
NCBI-GeneID:
107479089
NCBI-ProteinID:
XP_015954730
UniProt:
A0A6P4CP34
LinkDB
All DBs
Position
3:44836444..44839313
Genome browser
AA seq
613 aa
AA seq
DB search
MSVNLTANAIPSIIGGDVNSKPLVQVLDLSLISSSSNSQQQRYRMLLSDAVSSHQAMLAX
LQLLEYICSPLQNRKIIVVLNMETIIPDCEIIGNPKPFGESNLPTQKTSPDKVVQTSSRG
HNNNQQQTSQTGHAAQSFRPIVQPAYQPPPVYKNRGAIVKNEAPARIIPIAALNPYQGRW
AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYNAIQVGKVYT
ISKGSLKPAQKNFNHLKNDWEIVLDSNSNVELCPDEDDSIPKQQFSFRPIIDLENVDNNG
ILDVIGVVISVNPSVPILRKNGMETQRRILNIKDSSGRSVELTLWGEFCNREGQKLQEMA
DAGSFPIVAVKAGKVNDFSGKSIGTISTTQLSINPDLPEAHTLREWFDRVGKDSVSRSIS
KDVLPGGPKNEIRKTVSQIKDEGLGRSDKPDWITVRATVSFIKTDTFCYTACPLMVGDRQ
CSKKVTRVGDARWQCDRCNQEFEECDYRYLLQAQIVDHTGITWVTAFQEAGEEIMEYPAK
ELYLLKYEEQDDDKFGKIIKSSLFNHFVFRLKIKEELYGDEQRVKVTVVKADKVNYSSES
RYMLESISKFCRQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaatctaacggcaaacgcgattccgtcaataataggcggcgacgtgaactcg
aaaccgctggttcaggttctcgatttgtcgctgatctcaagcagtagcaactcgcagcag
cagcggtaccgcatgttgctatccgacgccgtttcgtctcaccaagccatgctcgcanna
cttcagctcctcgagtacatttgtagccctctccaaaaccgcaagattattgtagtactc
aacatggaaactataatcccagattgcgagatcattgggaatccaaaaccgtttggggaa
tctaatttaccaactcagaaaacatcacctgataaagttgtgcagacatcatccaggggt
cataataataatcaacaacagacttctcaaacaggtcatgctgcacagagtttccggcca
atagttcaacctgcatatcagccacctccagtttacaaaaaccgtggtgctattgtgaaa
aatgaggcaccagcacgcatcattcccatagcagctttaaatccttaccaaggtcgttgg
gcaatcaaggcaagggtaaccgcaaaaggggatctgcgccgctacaataatgctcgtgga
gatgggaaagttttctcatttgatctccttgattctgatggaggtgaaatacgagtaacc
tgctttaatgctgttgtagatcgtttctacaatgcaattcaagttggtaaagtttacaca
atatccaaaggtagcttgaaacctgcgcagaaaaattttaaccatttgaagaatgattgg
gaaattgtattggattcaaattcaaatgttgaactttgtccggatgaagatgattctatt
cctaaacagcaattctccttcaggccaataattgaccttgagaatgttgacaataatggc
attcttgatgttattggggttgtgatatctgtgaatccttcggttcccatcttgaggaag
aatgggatggaaactcagagaagaattttgaatataaaggactcctcaggcaggagtgtc
gagttaaccctttggggcgaattctgcaacagggaaggacaaaagctgcaagagatggct
gatgctgggtccttccccattgtggcagtcaaggcagggaaggttaacgacttcagtgga
aaatctattggtactatttctactacacagctttccataaacccggacttgcctgaggct
cataccttgagagaatggtttgatagagtgggaaaggattcagtttctcgatccatttct
aaggatgttttgccaggaggaccaaagaatgagatacgtaaaactgtgtctcagatcaag
gatgaaggcctggggcggtctgataagccagactggataacagtgagggcaaccgtatca
ttcatcaagacagatacgttttgttacacagcttgccctctgatggttggagaccgacag
tgcagtaagaaagtgaccagggtaggagacgcaagatggcagtgtgatagatgcaaccaa
gagtttgaggagtgtgattaccggtaccttcttcaagctcaaattgtggatcatacagga
ataacttgggtaactgcttttcaggaagcaggggaagagattatggagtacccagcgaaa
gagctgtacttgttgaagtatgaagagcaggatgatgacaagttcgggaaaataatcaag
agtagcctcttcaaccattttgtgtttaggcttaaaatcaaagaggaattgtatggtgat
gaacagagggttaaggtaacagtagtcaaggcagataaagttaattactcttcagagagt
agatacatgcttgaatcgatttccaagttttgtaggcagtaa
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