Arachis duranensis: 107479179
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Entry
107479179 CDS
T04300
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107479179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107479179
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107479179
mRNA degradation factors
5'-3' decay
Lsm complex
107479179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
107479179
NCBI-ProteinID:
XP_015954812
UniProt:
A0A6P4CP87
LinkDB
All DBs
Position
3:49663845..49670642
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AA seq
128 aa
AA seq
DB search
MSWPAPDDVLLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERLIVGDL
YCDVPLGLYVIRGENVVLIGELDLGKEELPQHMTCVSEAEIRKAQKAERDATDLKGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggcctgctccagatgacgtcttgctctctacctcccttgccacgtaccttgac
aaaaaacttcttgttctcttgagagatggtcgaaaacttttggggttattgcgctctttc
gatcaatttgctaatgttgttcttgaaggtgcatgtgagcgattgattgttggtgatctt
tattgtgatgtccctttaggcttatatgtgattcgtggagaaaatgttgtcttaattgga
gagctggatttgggtaaggaggagcttccacaacatatgacttgtgtgtcagaggctgaa
atacgaaaggctcaaaaggcagaaagggatgctaccgatctaaagggcaccatgaggaaa
aggatggagttccttgattttgattaa
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