Arachis duranensis: 107479230
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Entry
107479230 CDS
T04300
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
adu
Arachis duranensis
Pathway
adu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107479230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adu03009
]
107479230
Ribosome biogenesis [BR:
adu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107479230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_EIPR1
Beta-prop_WDR75_2nd
Beta-prop_VPS8
WDR54
Beta-prop_SCAP
WD40_RFWD3
TAF1C_beta-prop
Beta-prop_DCAF12
VPS8_N
VID27
WDCP
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
107479230
NCBI-ProteinID:
XP_015954894
UniProt:
A0A6P4CQ75
LinkDB
All DBs
Position
1:1818263..1824914
Genome browser
AA seq
909 aa
AA seq
DB search
MGIFEPFRAIGCITSGVPVSVQRLGTETFVTVSVGKAFQIFNCAKLNLVLVGPHLPKKIT
ALASFKEFTFVAYGHDIAVFKRAHQVATWSKHSEKVKLLLLFGDHVISVDIRGNMFLWAF
KGVMDQNNPSPFGHILLDQSFSPSCIMHPDTYLNKVLVGSEQGPMQLWNVSTKKKIFEFK
GWDSPITCCVSSPALDVVAVGCADGSIHVHNIRYDEELVTFTHSTRGSVTALSFCTDGQP
LLASGGSSGVISVWNLEKKRLQSVVREAHDSVITSLHFFANEPVLMSSSADNSIKMWIFD
TTDGDPRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQHNIS
RRAKKLKVKEEEIKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILN
PCPENPTPVKACAISACGNFAILGTAGGWIERFNLQSGLPRGAYIDMSESIRCAHDSEVV
GVACDSTNTLMISAGYQGDIKVWDFKERELKSRWEIGFSVVKIVYHHYNGLLATVANDLA
IRLFDVVALRLVRKFDGHTDRITDLCFSEDGKWLLSSSMDGSLRIWDVILARQIDAIHVN
VPITALSLSPNMDILATAHVDQNGVYLWVNQTMFSSTSTVDSYASGKEVVSVKLPSISSI
EHSQVEELDEMVDASQPKDAPHVPTQVNQIPDLVTLSLLPKSQWQSLINLDIIKMRNKPI
EPPKKPEKAPFFLPSVPSLSGEILFEPGKLSVEERDGAGDGKQMKKTRLDSTSSRFLHLL
QSSNSADNYGAFTDYIKGLSPSTLDMELRMLQIIDDNDDEQGENRPELVSIEQLMDYFIH
EVSCRNNFEFLQAVIRLFLKIHGETIRQHSHLQEKARKLLDIQCNVWQRVDKMFQSVRCV
VGFLSNSHI
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgggaatattcgaaccttttagagccattggatgcataacaagcggtgtccctgtttca
gttcagagactcgggaccgaaactttcgtcactgtcagcgttggaaaggcctttcagatt
ttcaactgtgcgaagctcaatttggttctagttggtcctcatctgccgaagaagattact
gcacttgcatccttcaaagaattcacttttgttgcatatgggcacgacattgcagtattc
aagcgtgcgcatcaggttgcaacttggagcaagcatagtgaaaaagtcaagttgctactg
ttgtttggagaccatgttatcagtgttgatattcgtggcaacatgttcttgtgggcattt
aagggagttatggatcagaacaacccttccccatttgggcacattttacttgatcagagt
tttagccccagctgtataatgcatcctgatacttacctaaataaggttctcgttgggagc
gagcaaggtcctatgcagctttggaacgttagcacaaagaaaaagatatttgagtttaag
ggatgggattcaccgatcacctgttgtgtttcctcccctgctctagatgtcgttgcagtt
gggtgtgcagatggaagcattcatgttcataacattcgttatgatgaagaattggttaca
tttacacattctacacgaggttctgtcactgccttatctttctgcactgatgggcaaccc
cttctagcttctggaggttcatcaggtgtcataagcgtatggaatctggaaaagaaaagg
ctccagtcagttgtaagagaagctcatgatagcgtgatcacatcactacatttctttgca
aatgagccagtgcttatgagttcttcagcagataattctattaagatgtggattttcgat
acgaccgatggtgaccctcgtcttttgcgctttcgaagcggccatagtgctcctccccta
tgcataaagttttatgcaaatggaagacatattctctctgctggtcaggatcgtgcattt
cggcttttctctgtagttcaggatcaacaaagtagagagctttctcagcacaatatttct
agacgagccaagaaacttaaagtaaaggaagaagaaataaagttgaagcccgtgattgca
tttgattgtgctgaaattcgagaacgtgattggtgcaacgtggttacttgtcatatggat
actgctcaggcatatgtgtggagacttcaaaattttgttcttggtgaacatatattgaat
ccctgcccagaaaatccgacacctgtaaaggcttgcgccatcagtgcatgtggcaatttc
gccatcctagggacagcaggtggttggattgaaaggtttaacctacaatctggactacct
cggggtgcttacattgacatgtcagaatcaataaggtgtgctcatgacagtgaagtggtt
ggagtcgcatgtgactcaactaacactctcatgataagtgcaggatatcaaggagatata
aaggtttgggatttcaaagaacgtgaacttaaatccagatgggagatcggtttttctgtt
gttaagattgtttatcatcattataatggtctcctggctacggtagcaaatgatttagca
atcagattgtttgatgttgtggctcttagattagttcgtaagtttgatggtcacactgat
cgcataacagacttgtgcttcagtgaggatgggaagtggcttttgtcatctagtatggat
ggaagtcttagaatttgggatgtgatcttagcaagacagatagatgcaattcacgttaat
gtgcctattacagcattatctctttccccaaacatggatatattagcaactgctcacgtt
gatcaaaatggggtatacctgtgggtaaaccaaacaatgttctctagtacttcaactgtt
gattcatatgcaagtgggaaagaggtggtgagtgtcaagttgccatcgatatcttccata
gaacattctcaagttgaggagttggatgagatggtggatgcttctcaacctaaagatgcc
ccacatgttccaactcaagttaatcaaatacctgatttggtcacactctcactgctgcca
aagagccagtggcaaagcttgattaatttagacattataaagatgcgcaataaacctatt
gagcctccaaagaagcccgaaaaagctccatttttcttgccttcagttccatccctatct
ggagaaatattgtttgagcctggtaagttatcagttgaagagagggacggagctggcgat
ggtaaacaaatgaaaaagacaagattagattcgacgtcatcccgttttctgcatcttctt
caatcctcaaactcggcagataactatggcgcattcactgattatatcaaaggattatct
ccatcaactctggatatggaacttcgaatgcttcagataattgacgacaacgatgatgaa
caaggtgagaatagaccggagttagtatcgattgaacagcttatggattatttcatccat
gaggtctcctgcagaaataatttcgagttcctacaagctgtcatcaggttatttttgaag
atacatggtgagacaattcggcagcattcacacttacaagaaaaggctcggaagcttctt
gatattcagtgcaatgtgtggcagagggtagataagatgtttcaaagtgtaagatgtgtg
gttggctttcttagtaattcccatatttag
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