Arachis duranensis: 107479500
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Entry
107479500 CDS
T04300
Name
(RefSeq) regulator of nonsense transcripts UPF2
KO
K14327
regulator of nonsense transcripts 2
Organism
adu
Arachis duranensis
Pathway
adu03013
Nucleocytoplasmic transport
adu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107479500
03015 mRNA surveillance pathway
107479500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107479500
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107479500
mRNA cycle factors
P-body specific factors
107479500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Cytomega_UL84
Xpo1
Motif
Other DBs
NCBI-GeneID:
107479500
NCBI-ProteinID:
XP_015955114
UniProt:
A0A6P4CRC6
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All DBs
Position
3:complement(68323985..68340477)
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AA seq
1163 aa
AA seq
DB search
MEPQPEEAVARLEELQKTIEAKMTLRQSNLNPDRPDSGFLRTLDSSIKRNTAVIKKLKQI
NEEQRETLMDELRSVNLSKFVSEAVTAICDAKLRSSDIQAAVQVCSLLHQRYKDFAPCLI
QGLLKVFSPGKPGDESDADRNLKAMKKRSTLKLLLELYFVGVIDDGNIFMNIIKDLTGMD
QLKDRDAAQTSLTLLSSFARQGRIFLGLPVSGPEIHEEFFKGLNITADQKKVFRKACYAF
YDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRKSYDHLYRNISSLAEA
LDMQPPVMPEDGHTTRVTTGEEATSAGGKDSSIAEPVWDDEDTRAFYECLPDLRAFVPAV
LLGEAEPKTSEQSVKSQDQPTEIVPESDKGQLGNHDSGDASAESSAVPEGGSAEKAKDKE
EREKSKELEKEKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEF
CYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLI
NKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGR
FLYRSPETTIRMTNMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLH
QYIRKLLFSDLDKSTIEHVLRQLRKLPWSECEPYLLKCFLKVYKGKYGQIHLIASLAAGL
SRYHDEFAVAIVDEVLEEIRVGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLY
LIVIYGHGTPEQDALDPPEDCFRIRLIITLLETCGHYFDRGSSKRKLDRFLIHFQRYILS
KGALPLDIEFDLQDLFAELRPNMVRYTSVDEVNAALVELEEHDRMVSADKASSEKHSDTE
KPLSRTSSNTVVSNGQGIDNGAEENGVQDDVNDSDTDSGSGTIDAEGHDDEELDDENHDD
GCETEDDDDDDDGPGPASDEEDEVHVRQKVTEVDPLEEANFEQELKAVLQESMEQRRQEL
RGRPTLNMMIPMNVFEGSTKDHHGRGVGGESGDEALSEETGGNKEVQVRVLVKRGNKQQT
KQMYIPRDSSLVLSTKQKEAAELQEKEDIKRLVLEYNDREEEELNGLGSQPTNWMASASQ
LYWQWHLLRQEEVNAILEGRYCI
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcagcctgaggaggctgttgcacgccttgaggagttgcaaaagacaattgag
gcaaagatgacattacgacaaagcaatttgaatcctgataggcctgactcaggattttta
aggactctggattcaagcattaagcgcaatactgcagtcattaagaaactgaagcagatt
aatgaagagcagcgtgaaacactgatggacgagttgcgcagtgtcaacttaagcaaattt
gtcagtgaagctgtgactgctatatgtgatgccaagcttagaagctcagatatacaagca
gcagttcaggtctgctctttgcttcatcagaggtacaaggactttgccccatgcctgatt
caaggacttctcaaagttttctctccaggaaagcctggggatgaatcagatgcagacaga
aacttgaaggcaatgaagaaacgcagtactttgaaacttctattggagctttattttgtt
ggagttattgatgatggcaacattttcatgaatatcataaaagatctaactggtatggat
cagctaaaagaccgagatgcagcacaaactagtttgacccttctttctagctttgcccga
caagggagaatctttctgggacttcctgtttctggtccagaaattcatgaagagtttttt
aaaggccttaacattacggcagatcaaaagaaagttttcaggaaagcatgttatgcattt
tatgatgctgcagcagaactacttcagtctgagcattcttcacttcgactaatggagcat
gaaaattctaagattcttaacgcaaaaggagagctcagtgatgaaaatattgcttcatat
gaaaagcttcggaaatcttatgaccatttgtatcgtaacatctcatcattggcagaggca
cttgatatgcaacctccagtaatgccagaagatggtcacacaacaagagttactactggt
gaggaagctacttctgcgggtgggaaagattcttctatagctgaacctgtatgggatgat
gaagatacaagggctttctatgaatgtttacccgatctaagagcttttgttcctgctgtg
cttttgggcgaagcagagccaaaaacaagtgagcaatcagtgaaaagtcaagaccaacca
actgaaatagtacctgaatctgacaaaggtcaactgggcaaccatgacagtggagatgca
tcggcagaatctagtgctgtgccagagggaggaagtgcagaaaaagcgaaggataaggaa
gaaagagaaaaatcaaaagaattggaaaaagagaaggagaaagaaaaagacaatgacaaa
aagggggaaaatgaaaaggacaaactcagaagccttgaggggacaaatttggatgcttta
ttgcaaagacttcctggttgtgtgagccgagaccttatagatcaattgactgtagaattc
tgttatctaaattcaaaatcaaatcggaaaaaacttgtgagggctttgttcaatgtacca
aggacatctctggagctgctaccatattactcacgcatggttgctacactctcaacttgt
atgaaggatgtctcctccattcttttgcagatgttggaggaggaattcaacttcttaata
aataagaaggaccagatgaatattgagacaaagataaggaacatcaggttcataggagaa
ctttgcaagttcaaaattgcccctgctggcctagtctttagttgtttgaaggcctgttta
gatgattttactcatcacaacattgatgtagcttgcaatcttcttgaaacatgtggccgt
tttctataccgatcaccagaaactactatacgtatgactaacatgttagagatactgatg
cgcttgaaaaatgtgaagaacttagatccaagacatagcactttggtggaaaatgcatat
tacctttgtaagcctccagaaagatctgcacgagtggctaaagtccgtccaccattgcat
cagtatatcagaaaattacttttctctgatctggataagtctaccattgagcatgtgttg
aggcaacttagaaaattaccatggagtgaatgcgaaccatatcttttgaaatgtttcctg
aaggtctataaagggaaatatggccagatccatctgattgcttctcttgctgctggttta
agtcgctaccatgatgagtttgcagtggctatagttgatgaggttttggaggagattaga
gttgggctggaactaaatgactatgggatgcagcaaagacgcattgcctacatgagattc
ttaggggagctttacaactatgagcatgtagattcatctgttatttttgagacactatac
cttatcgtcatctatggccatgggacaccagagcaagatgcactggatccacctgaagat
tgttttcgtataaggttgatcattactcttcttgaaacctgtggacattactttgatcgt
ggctcttcaaagaggaaacttgatcgattccttatacacttccagaggtatattttaagc
aaaggtgcactgcctctcgacattgaatttgacttgcaggatctgtttgcggagttgcgt
cccaatatggttagatatacatctgttgatgaagtgaatgcagctctagtagaacttgaa
gaacatgatcggatggtttctgctgataaggccagtagtgaaaaacattctgatactgag
aagcctttgagtaggactagttctaacacagtggtaagcaatggacaaggcattgataat
ggtgcagaggagaatggagtgcaagatgatgttaatgacagtgacactgactcagggagt
ggcaccattgatgcggagggacatgatgatgaagagttggatgatgagaatcatgacgat
ggatgtgagactgaggatgatgatgatgatgatgatgggcctggacctgcttctgatgag
gaagacgaagtccatgtgagacaaaaggtgacagaggtggaccctctggaggaagccaat
tttgaacaggagctgaaggctgtgttacaggagagtatggaacagcgaaggcaggagcta
cgaggccgtcctacattgaacatgatgattccaatgaatgtatttgagggatccactaag
gatcatcatgggagaggagttggtggtgaaagtggtgatgaggcattgagtgaggagacc
ggtggaaacaaagaggttcaagtgagagttcttgtgaagcgtgggaacaagcagcaaaca
aaacagatgtacatcccacgggattcctcactggttctgagtacaaaacagaaagaagca
gctgagcttcaagagaaagaagacattaagaggcttgtcttggagtataatgatagagaa
gaggaggagcttaatggactagggtcccaaccaacaaattggatggcatcggcatcacaa
ttatactggcagtggcatctactacggcaggaggaggtaaatgcaatattggaaggcaga
tattgtatataa
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integrated database retrieval system
