Arachis duranensis: 107480978
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Entry
107480978 CDS
T04300
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
KO
K14962
COMPASS component SWD2
Organism
adu
Arachis duranensis
Pathway
adu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107480978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107480978
03036 Chromosome and associated proteins [BR:
adu03036
]
107480978
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107480978
Chromosome and associated proteins [BR:
adu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
107480978
COMPASS/SET1 complex (yeast)
107480978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
KNTC1_N
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
PQQ_2
WD_LRWD1
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Cytochrom_D1
VPS11_N
Motif
Other DBs
NCBI-GeneID:
107480978
NCBI-ProteinID:
XP_052115299
UniProt:
A0A6P4CU08
LinkDB
All DBs
Position
3:123930034..123958671
Genome browser
AA seq
335 aa
AA seq
DB search
MGGIQQENREEKVSLELSEEILQSMEVGMAFKDYNCKISSMDFHRATSYLVTASNDESIR
LYDVTAGTCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDESLRLLSLHDNKYLRYFKG
HHDRVVSLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAISYDDQGLVFAIA
FGGYIRMFDARKYEKGPFEIFSVGGDISDANTVKFSNDGRLMLLTTADGHIHVLDSFRGT
LLSTYNVTPVSCNSTLEASFSPEGMFVISGSGDGSIYAWSVRSGKEVGSWRSATADTGPP
VIKWAPGSLMFATGSSELSFWVPDLSKLGSYVGRK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggatacagcaggaaaacagagaagagaaggtatctttggagctcagtgaggaa
attcttcagagcatggaagttggaatggccttcaaagactataattgtaaaattagttcc
atggattttcacagggcaaccagctatctagtcactgctagcaatgatgaatccattcgt
ctctatgatgtcactgccggaacatgtttgaagacaattaacagcaagaagtatggggtt
gacttggtttgtttcacgtctcatccgaccactgtcatatactcatctagaaatgggtgg
gatgaatctctgcggcttctatcgttgcatgataacaagtatttgagatatttcaaaggt
catcatgacagggttgtctcacttagcttgtgctcccggaaggagtgctttatttctgga
tctcttgatcgaactgttttactatgggatcaaagggccgagaaatgccagggactttta
cgtgtacaaggaaggcctgctatttcatatgatgatcaagggcttgtttttgcaattgcc
tttggaggatacataagaatgtttgatgcacgcaagtatgaaaagggtccctttgagatc
ttttctgttgggggagatatttctgatgcaaatacagtgaaatttagtaacgatgggaga
ctcatgcttttaacaactgcagatgggcatattcatgttcttgattcatttcgtggcaca
cttttatcaacatataatgtcacacctgtctcgtgcaactccacgttagaagcttctttc
agtccagagggaatgtttgtaatatccggttctggggatggcagcatttatgcatggagt
gttcgaagtggtaaagaggttggtagctggaggagtgcaactgctgatactggaccaccg
gtgataaaatgggcaccgggaagtctcatgttcgcaaccggatcttctgagctatcattt
tgggtcccagatttgtctaagttgggatcttatgttggaagaaagtaa
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integrated database retrieval system
