Arachis duranensis: 107482330
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Entry
107482330 CDS
T04300
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107482330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107482330
03012 Translation factors [BR:
adu03012
]
107482330
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107482330
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107482330
Translation factors [BR:
adu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107482330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_16
Myosin_head
AAA_23
Motif
Other DBs
NCBI-GeneID:
107482330
NCBI-ProteinID:
XP_015958266
UniProt:
A0A6P4D2I7
LinkDB
All DBs
Position
4:1897326..1910769
Genome browser
AA seq
1106 aa
AA seq
DB search
MHSFLIARLRCLHLPKNHLSVPYTFKLRFQRFISTRLFSRYAFEQFSDDEYDCDFENHHA
SSTVVNVDEWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIANLAKRMGLYSELFGKVVVA
SKVPLPNYRPDLDDKRPQREVVVPLSLQRRVEGLLQEHLDRLHLNSEKAIGKGDYVTPPG
QDNDIDLDENADSFVDGSVMEKVLQKRSLRMRNMQRAWQESPEGKRMLEFRKSLPAFKEK
EGLLQAIARNQVIVISGETGCGKTTQIPQYVLESEIESGRGAFCSIICTQPRRISAMAVS
ERVSSERGEPLGETVGFKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEI
HERGMNEDFLLIVLKDLLPRRPDLRLVLMSATLNAELFSNYFGSAPTFHIPGFTYPVRAH
FLEDVLEMTGYKLNSFNQIDDYGQEKMWKTQKQLAPRKRKNQITALVEDALSKSSFESYS
SRARDSLAAWAPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWEDISCLRDQLKAHPLLG
DPNRILLLTCHGSMATSEQKIIFERPPPNVRKVILATNMAEASITINDVVFVIDCGKAKE
TTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRT
PLNSLCLQIKSLQVESIGEFLSAALQAPEPRAVQNAIDFLKMIGALDEKESLTHLGKFLS
MLPVDPKLGKMLIMGAIFRCFDPVLTIVAGLSVRDPFLLPQDKRDLAGTAKSRFSAKDYS
DHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRKQFNFILKEAGLVDTDAS
LNNKLSHNQALVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVLLYANSVNARYQTIPY
PWLVFGEKVKVNAVFIRDSTGVSDSILILFGGALSNGIQAGHLKMLDGYVDFFMDPNLSD
CYLKMKEELNKLIQKKLDDPSIDIHKEGKYLMLAVQELVTGDQCEGRFVFGRESRKPKPS
SDENRFTKDGTNPKSLLQTLLMRAGHSPPTYKTKHLKTNEFRALVEFKGMQFVGKPKRNK
QLAERDAAIEALAWLTHTSDNYQRSG
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgcattcttttctcatagcacgtctcaggtgcctccatcttcccaaaaatcacctttct
gttccttacactttcaaactcagattccaacgtttcatttcaacgcgcctcttctctcgt
tatgcattcgagcagttctccgacgatgaatatgactgcgatttcgagaaccaccacgca
tcgtccacagtggtcaacgtggatgaatggaaatggaaactcagcatgctgttacgcagc
gaaaaggaccaggagattgtatctagagacagaaaagataggagagactatgaacagata
gctaaccttgccaaacgaatgggactttacagtgagttgtttgggaaagtggttgttgca
agcaaggtgcctcttcctaactaccgaccagatttggatgacaaacgtccacaaagggag
gtggtggttccactaagcttgcaaaggagggttgagggtttgttgcaggagcaccttgat
agacttcatttgaattctgaaaaggcaattggcaagggggattatgttacaccccctggt
caggataacgatatagatttggatgaaaatgctgattcatttgtggatggatctgttatg
gaaaaggttctgcagaagaggagtttaaggatgcgtaatatgcaaagagcttggcaggaa
tcacctgaaggaaagaggatgctggaattccggaagtctcttccagcattcaaagagaag
gaaggtttacttcaagctatagctcggaatcaggtgatagtaatatctggagagactggc
tgtggtaaaactactcaaattcctcagtatgtattagagtcagagatagagtctggccgt
ggagcattttgcagcattatttgcacacaacctcgaaggatatctgccatggctgtatct
gagagagtgtcatctgagagaggcgagcctctcggtgaaacagttggtttcaaagttcga
ttagaaggaatgaaaggaaaaaacacccatttgctcttttgtaccagtggtatattactt
cgaaggctgctgagtgatcgaaacctgaacggtataacacatgtttttgttgatgaaatt
catgagcgaggcatgaatgaagacttcttactgattgtgttgaaggatcttcttccacgt
cgtccagatttaagattggttctaatgagtgctaccttgaatgctgagcttttttctaat
tattttggaagtgcaccaacgtttcatattccgggcttcacctatcctgtgagagctcac
ttcttagaagatgttttggaaatgactgggtataagttgaattctttcaaccaaatcgat
gattatggtcaggagaaaatgtggaaaacacaaaagcagctagcaccgcgaaaaaggaaa
aatcagatcactgcccttgttgaggacgcactttctaaatcgagttttgagagctacagt
tccagggcacgtgattcactagcagcgtgggcacctgattgcattggatttaatcttatt
gaggccgttctgtgccatatttgtcgtaaggagcgaccgggtgctgttttagtgtttatg
actggatgggaggatataagctgtttaagagatcagcttaaagcacatcctctcttagga
gatccgaataggattctgcttctaacatgtcatggttcaatggcaacttctgaacagaaa
atcatatttgagagaccacctcctaatgtaaggaaagtaatacttgccacaaatatggct
gaagcaagtattacaatcaatgacgtagtatttgtaattgactgtggaaaagcaaaagag
accacttatgatgctttgaataacacaccatgtctactaccttcttggatttcacaagca
tctgctcgtcagagaaggggtagggctggtcgtgtgcagccaggagagtgctatcacctt
taccctaaatgtgtttatgaagctttttctgaatatcaacttcctgagctgctcagaaca
cccttaaattcgctttgtttacaaataaaaagtttgcaggttgagagcataggggagttc
ttgtcggcagctttgcaggcaccagagccacgggctgtccaaaatgctattgattttctc
aagatgattggagcattagacgaaaaagaaagtcttacccacctcgggaagtttctctct
atgcttccagtagaccccaagctagggaaaatgttaataatgggagctatatttcgttgc
tttgatcctgttcttacgatagttgctggccttagtgtcagggacccattccttttgccc
caagacaagagagatttagccggaacagcgaagtctaggttttctgctaaggattatagc
gatcatatggctcttgttcgagcatatgaaggatggaaagatgcagaaagagaagggtct
gcttatgaatactgctggagaaatttcctctctgcccaaacccttcaggctatccattca
cttaggaagcagtttaacttcattttgaaagaagctggcttggtagacacagatgctagc
ctcaacaacaaattgagtcacaatcaagctcttgtgcgtgcagtcatttgttctggactc
tttcctgggatagcatcagtagtgcatagggagacatccatgtcatttaaaacaatggac
gatggccaggttttattatacgcaaattcagtgaatgcacgttaccagaccattccttac
ccatggctggtttttggtgaaaaggtgaaggtcaatgctgtcttcatccgcgactccacc
ggtgtatctgactcaatactcatcctctttggtggcgctctaagtaatgggatacaggct
gggcatctgaaaatgttggatgggtatgtcgacttcttcatggatcctaatttatctgat
tgctatttgaagatgaaggaagagcttaataagcttatccaaaagaagctcgatgatcct
agcattgacattcacaaggaaggaaagtatttaatgcttgcagttcaggaactggttaca
ggggatcaatgtgaaggaagatttgtatttggccgtgaaagcaggaagcccaagccctct
agcgacgagaatagatttacaaaagatgggacgaaccccaagagcttgttgcaaacactg
ttgatgcgagcgggtcactcgccacccacatacaaaacaaaacatttaaagacaaatgaa
tttagagcattggtggagtttaaaggcatgcaatttgttggcaaaccaaagagaaacaag
cagcttgcagaaagagatgctgctatagaggcattggcttggctgactcacacctctgac
aattatcaacgctctggttga
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