Arachis duranensis: 107482894
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Entry
107482894 CDS
T04300
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107482894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107482894
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107482894
mRNA degradation factors
5'-3' decay
Decapping complex
107482894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_EDC4L
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_Vps41
GerPC
Motif
Other DBs
NCBI-GeneID:
107482894
NCBI-ProteinID:
XP_015958963
UniProt:
A0A6P4CXM3
LinkDB
All DBs
Position
4:complement(6486786..6494762)
Genome browser
AA seq
1442 aa
AA seq
DB search
MASSPGNPNQQQQSNHFDLQKLFKGTTPPTPNPSSSSSSSNLNSSPSFPAPSPSTPPPSS
YPTPSSSYPPPTGTYPYHHQFPHFLPPYPNLQHFQQQQQQQEHPFVLHHQQQQQQLPQMI
SPQRPVFQQQQSSSSPSPSPSSPSPHVPTSPNSGARLMAMLGTQNPQSNQEQSVMNQSPS
SIASTSQSSASASAPPVPMVSDFLMPGTSNHPAAVLLPSSGSQPPQALPAGVVSPQGSTP
MRMLSSKLPKGRHLIGENVVYDIDVRLPGEVQPQLEVTPITKYASDPGLVLGRQIAVNRS
YICYGLKLGAIRVLNINTALRYLLRGHTQRVTDMAFFAEDLHLLASASTDGRIFVWKINE
GPDEEDKPQITGKVITAIQITGESDSVHPRVCWHPHKQEILMVAIGNRILKIDTMKAGKG
ETFSAEEPLKCSIDKLIDGVQLVGKHDGNVTELSMCQWMKSRLASASADGTVKIWEERKS
TPLAVIRPHDGKPVNSVTFLTAPHRPDHIILITAGPLNQEVKIWVSDNEEGWLLPSDSES
WNCIQTLDIRSSYETNPEDAFFNQVVALPRAGLFLLANAKKNTIYAVHIEYGANPTATRM
DYIAEFTVTMPILSLTGTSDMLPDGEHIVQVYCVQTQAIQQYALNLSQCLPPPLDNVEVE
KTESNLSRGVDALDASANMETANVPQVNPSSSESAPVVSAPVSLPSSDISGLPEASTSDP
ETKENDLSSNNGFDHINTSAPPLPLSPRLSHKLSGLKGSSNNLETISTSADHSFEQPNSD
PSAERRIESEKDNTADVPASGDSSLKNNRAVQNDVSAVSNAPTAFKHPTHLVTPSEIFSK
ATLSSENSLTSQGMNVKDVAAHSDTENLEVEVKVVGETGLNQENTEYDRDRDSYTNVAER
KEKLFYSQASDLGIQMARDSYNIEGVRPADSIKTIDAPDQSRSSIEEEVHEVSKDVSAND
GESETVTATSQSPAPAMKSKKQKGKGSQVSGTSSANPSPFNPMDSSNDQSGNSGGSSIEA
ALPQLSAMQDMLSQLLGMHKELQKQMNVTVSIPVTKEGRRLEGSLGRSMEKVVKSNTDAL
WARLQEEHAKQEKLERERTQQITNLISNFVNKDMAAVLEKIVKKEISSIGPTVTRSISQI
IEKAVSSAVAESFQKGVGDKALNQLEKSVTSKLEATVARQIQAQFQTSGKQALQEALRGS
LEASIIPAFEMSCKAMFEQIDASFQNGLAKHTAAIQQQYDTTHSPLAITLRDTINSASSI
TRTLSGQLAEGQRKLLAMAGNSTASADPFVMQISSGLHEVVAEDPTKELSRLVSEGKFEE
AFTGALHRSDVSIVSWLCSQVDLTAILSLVPLPLSQGVLLSLLQQLSCDLGTDTPRKVSW
MTDVAASINPTDPRIAAHARRILDQVSRTLNHHRNLSTTSPSEASSMRLLMHVINSVLLS
CK
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcacctgggaatccaaatcaacagcagcaaagtaaccattttgatttgcag
aaactattcaaaggaacaacaccaccaaccccaaatccttcttcttcttcatcttcttca
aacttgaactcttcaccatcattcccagctccttcaccttcaacaccacctccttcttca
taccctacaccttcttcttcttatcctccacccactggcacatacccttatcaccaccaa
tttcctcactttcttcctccttatccaaatctccaacacttccaacaacagcaacagcaa
caagaacacccttttgttcttcaccatcagcagcagcagcagcagcttcctcaaatgatt
tctcctcaaagaccagtttttcagcagcagcaatcctcatcatcaccttcaccttctcct
tcatcaccatcaccacatgttcctacatctcctaatagtggtgctcgccttatggccatg
ttaggcacccaaaaccctcaatccaatcaagaacaatcagttatgaatcaatcaccatca
tcaatagcatcaacatcacaatcttctgcatcagcatcagcaccaccagttcctatggtt
tctgatttcttaatgcctggcacttcaaaccaccctgctgcagtgttgttgccctcatcc
gggtcgcagccgccgcaggctttgccggccggtgtggttagccctcagggcagcacccca
atgaggatgctgagcagtaaactcccaaaggggagacatttgattggagagaatgttgtt
tatgacattgatgttaggttgccaggggaagtgcagcctcagcttgaggtcactcccatc
actaagtatgcctctgatcctggccttgttctcggccgccaaatcgccgtgaataggtct
tacatatgctatggactcaagcttggtgccatcagagtccttaatattaatactgcattg
agatatttgcttcggggtcatactcagagagtaacagacatggctttctttgctgaggat
ctacatctgttggccagcgcaagcactgatgggagaatttttgtttggaagattaatgag
ggtcccgatgaggaagacaaacctcaaattactggtaaagtgatcacagccattcaaata
acaggggagagtgactcagttcatccacgagtatgctggcatcctcacaaacaagagatt
ttaatggttgctattggaaaccgtatcctcaaaattgacactatgaaagccggaaaaggt
gaaactttttctgcagaagagcctctcaaatgttcaattgataagttgattgatggggtg
cagcttgttggtaagcatgacggcaatgtcactgagttgtcaatgtgccaatggatgaag
agtcggttagcttcagcatcggcagatggcacggtgaagatatgggaagaacgtaagtca
acaccacttgctgttataagaccacatgatggtaaaccggttaattccgtgacattcttg
actgcccctcaccgccctgatcacatcattcttatcacagcgggcccactaaatcaggaa
gtgaagatatgggtgtctgacaacgaggaaggctggttattgcctagtgattccgagtca
tggaattgtattcaaactttggatataagaagttcttatgaaactaaccccgaggatgca
ttctttaatcaagttgtagcactgccacgagctggtttgtttctgctagcaaatgccaag
aaaaatacaatatatgctgtacatatagagtatggagcgaatccaactgctactcgtatg
gattacattgctgaattcacggtcacaatgcctatactaagtcttacaggaactagtgac
atgttacctgatggtgagcatattgtacaggtgtattgtgtccaaactcaagctatacaa
caatatgcgctcaatttgtcacaatgcttgcctccgccattggataatgttgaagttgag
aaaacagaatctaatctatcacgtggtgttgatgctttggatgcgtctgctaatatggaa
actgcaaatgtgccacaagttaatcctagcagctctgaaagtgctcctgttgtaagtgct
cctgtaagcttgccttcttcagatatttctggtctgcctgaagcatctacttcagatccc
gaaaccaaggaaaatgatttgtcttctaataatggctttgatcatattaatacttcggca
cctccacttcctctgagcccaagattgtcccataagttatcaggtttgaaaggttcatca
aataatttagaaactatttcaaccagtgcagatcacagttttgagcagccaaattccgat
ccttcggctgaacggagaatagagtctgagaaagataatacggctgatgtgcctgcgtcg
ggtgacagttctttgaagaataatagagccgtacaaaatgatgtctctgcggtttctaat
gccccaacagcatttaaacacccgactcatctggtaaccccatctgagatattctcgaaa
gctacattatcttctgagaattcactaacttcccaagggatgaatgtgaaggatgttgct
gcccatagcgacacagaaaaccttgaagtagaggttaaagtggtaggtgagactggttta
aatcaagaaaatactgaatatgacagagacagagattcttacaccaatgttgccgagagg
aaagagaagttattctactctcaagcgtctgatttgggcattcagatggccagagattca
tataacattgagggagtacgtccagctgatagtattaagacgattgatgcacctgatcaa
agccgtagctctattgaggaagaagttcatgaagtgagtaaggatgtatctgcaaatgat
ggtgaatcagaaactgtgactgctacttcacaatctccagcacctgccatgaaaagtaaa
aaacaaaaaggcaaaggttctcaagtgtccggtacatcatctgctaaccccagccctttc
aacccgatggattcatcaaatgatcaaagtggcaattcaggaggctcatccattgaagcg
gctctaccacagttatccgctatgcaggatatgctgagccagttattaggcatgcataag
gaattgcaaaagcagatgaatgtgacagtttccatcccagttacgaaggaaggcagaaga
ttagaaggatccttgggccggagcatggagaaagttgtcaagtccaacacggatgccttg
tgggctcgcttgcaagaagaacatgcaaagcaagagaagttagagagagaacgtacacag
cagataacaaacttgatctccaattttgtgaacaaggatatggcagctgtattggagaaa
atcgttaagaaggaaatatcctcaattgggccaactgtcactcgttcaattagtcaaatt
atagagaaagcagtatcatcagctgtcgcagagtcattccagaagggggtgggagacaag
gcattgaatcaactagaaaaatccgttacttcaaaacttgaagctacagtagctaggcag
atacaagcacaatttcaaacttctggcaagcaagctcttcaagaagcacttaggggtagt
ttggaagcttcaattattccagcatttgagatgtcttgcaaagccatgtttgagcaaatt
gatgcctcatttcagaatggtcttgcaaagcacacagcagctattcagcagcagtatgat
actactcattctcctctagccataactttgagggatacaattaattcagcgtcatcaatc
actcgcactttgagcgggcaattggccgagggccagcggaaactgctagcaatggcaggt
aactccacggcatctgcggacccctttgtaatgcaaatcagcagcggtttacatgaggtg
gtggctgaggatcctaccaaggaactatcaaggctggtgagtgagggcaaattcgaggaa
gcatttaccggagcgcttcatagaagtgatgtttcaatcgtttcgtggctatgttctcag
gttgatttaactgcaatcttgtcattggtaccacttccattaagccaaggagtacttctg
tccctgctgcagcaactatcctgtgacctgggaaccgatacaccaagaaaagtgtcctgg
atgacagatgtggctgcgtctatcaaccctaccgatccaaggatcgcagcacatgcccgg
cggatattggatcaagtgtcccggacgctaaaccaccaccgaaatttgtcaacgacctcc
ccttcggaagcaagctcgatgcgccttctaatgcatgtcataaattctgtgttattgagc
tgtaaatga
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integrated database retrieval system
