Arachis duranensis: 107483134
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Entry
107483134 CDS
T04300
Name
(RefSeq) LOW QUALITY PROTEIN: 30-kDa cleavage and polyadenylation specificity factor 30
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
adu
Arachis duranensis
Pathway
adu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107483134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107483134
03019 Messenger RNA biogenesis [BR:
adu03019
]
107483134
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107483134
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107483134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_12
zf-CCCH_3
CR_prot_dom_plant
Torus
Motif
Other DBs
NCBI-GeneID:
107483134
NCBI-ProteinID:
XP_015959242
UniProt:
A0A6P4CY81
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All DBs
Position
4:8154255..8161518
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AA seq
700 aa
AA seq
DB search
MEDSEGVLSFDFEGGLDAAPPAAAAVSAPSAGLLSNQNDSTAAAAAAAVPNGAAAAAPTA
GDPGAAGNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQ
DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSAGPPPSVDEVLQKIQHLYSYNYNAS
NKFFQQRGSNYNQQAEKSQFPQGNNSTNQAVAGKPLQAESGNVQQQQVQQAQQPVNQSQV
QNVASGQPNQANKTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFD
SVENVILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELS
FHKTRHLRNPYNWRNILFMXLQISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESK
REEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGHVVGPAVQGRGRGRGMMW
PPHMPLARGARPMPGMPGFNPVMMGDGLSYGPVGPDGFGMPDLFGVGPRGFPPYGPRFSG
DFAGPPAAMMFRGRPSQPGMFPGGGFGMMMNPARPPFMGGMGANPPRASRPVNMPPMFPP
PPPPPQNHNRLVKRDQRINDRNDKFGSGLEQGKNQDMMSQSGGPDEDMQGYKAQQDDQYA
VNTFRNDDSESEDEAPRRSRHGEGKKRRRSLEDANASSNH
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccgagggagtcctcagcttcgatttcgagggcggcctcgacgctgctccc
cccgctgccgccgccgtctccgcaccctccgccggacttctctccaatcaaaacgattca
accgcggcggccgctgcagccgcggttcccaatggcgctgccgcagctgcgcccactgct
ggagaccccggagctgccggaaatgtgcccgggaggcggagcttccggcagacggtgtgc
cggcactggctaaggagcttgtgtatgaagggagacgcgtgcgggttcttgcatcagtac
gacaaggcgaggatgccggtgtgccggttctttcggctgtacggtgagtgccgcgagcag
gattgcgtgtacaagcacaccaacgaagatatcaaggagtgtaacatgtacaagttagga
ttttgtcctaatggacctgattgccgatacagacatgctaaatctgctggacctccacct
tctgttgatgaggtccttcaaaagatccagcatttatattcttacaactacaatgcatcg
aacaagtttttccaacaaaggggttcaaactataatcaacaagctgaaaaatctcaattt
cctcaaggaaataattctacaaaccaagctgttgctggaaaaccattacaagcagagtcg
ggtaatgtccagcagcaacaagttcaacaggctcagcagccagtcaatcaaagccaagtg
caaaatgttgctagtggtcagcccaatcaggcgaataaaactgcaactcctttacctcaa
ggaatatctaggtattttattgttaaaagttgcaatcgtgaaaatttggagttatcagta
caacaaggagtatgggcaacacaaaggagcaacgagtcaaaactaaacgaggcttttgat
tctgtggaaaatgttatactgattttctcagtcaaccgaactcgccatttccagggttgt
gcaaagatgacctccagaattggtggttctgttgctgggggaaactggaaatatgctcat
ggaactgcacattatgggcggaatttctctgttaaatggttgaagttatgtgaactgtca
ttccacaaaactcgccatttgaggaatccatacaattggagaaacattctgttcatgtaa
ttgcagataagtagagattgtcaggagctggaaccctccatcggtgagcagttggcatcc
ttgctttatcttgagccagatagtgagcttatggctatctcaattgcagcagagtctaaa
cgagaagaagagaaggcaaagggagtgaatccagacaatggaggagagaatccggatatc
gtcccatttgaagacaacgaagaagaggaagaggaagaaagtgatgaagaggaggagagc
tttggtcatgttgttgggccagctgttcaaggcagaggtaggggcagaggcatgatgtgg
ccgcctcacatgcctcttgcacgcggagccagacctatgcctggaatgccaggttttaac
ccagtaatgatgggtgatggattatcatatgggcctgttggacctgatggcttcggtatg
cccgatctttttggtgtgggccctcgtggttttcctccatatggtcctaggttctctggt
gattttgcaggaccccctgcagccatgatgttccgtgggcgaccttcccaacctgggatg
tttccaggtggtggatttgggatgatgatgaatcctgcacgtcctccctttatggggggg
atgggcgcaaatcctccaagagccagtaggccagttaatatgcctccgatgtttccaccg
ccaccacctccacctcaaaatcacaaccgacttgtaaagagggatcaaagaattaatgat
cggaatgataaatttggttcaggattagagcagggcaagaatcaggatatgatgagtcaa
agtggtggacctgatgaagacatgcaaggatacaaagcacagcaggatgatcagtatgct
gtcaacaccttcaggaacgatgatagtgaaagcgaggatgaggcacctcggcggtcaagg
catggagaggggaaaaagagaaggcgaagcttagaagatgccaatgcaagctctaatcac
tag
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integrated database retrieval system
